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berkeley_reactor_200306_biofilm_scaffold_12255_97

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 100985..102424

Top 3 Functional Annotations

Value Algorithm Source
D-hydantoinase {ECO:0000313|EMBL:AHK05016.1}; EC=3.5.2.2 {ECO:0000313|EMBL:AHK05016.1};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 480.0
  • Bit_score: 774
  • Evalue 7.20e-221
Dihydropyrimidinase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X2U6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 477.0
  • Bit_score: 634
  • Evalue 6.40e-179
hydA; dihydropyrimidinase similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 480.0
  • Bit_score: 774
  • Evalue 1.50e-221

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGACCTATGATCTCGTCATCCGCGGCGGCACCATCGCCACCGCCTCGGATGTGGGCAAAGCGGATGTCGGCATCCGCGACGGGCGCATCGTGTCGATCGCCGACCGCCTGACCGGCGGCGACGTCACGCTCGACGCCACCGGGCGGCTGGTGCTGCCCGGCGGCATCGACGCCCATTGCCACCTCGACCAGCCGCAGGCGCCGGGGCTCGCCTCCGCCGGCGCCGTGATGGCCGACGGCTTCAGGAGCGGCAGCATCAGCGCGGCCTTCGGCGGCACCACGACGATCGTGCCGTTCTGCGTCCAGCACCGGGGCGAGTCGCTCCTCGCCGCCGTCGAGGACTATCACCGCCGGGCCCGCGGCGAGGCCGTCATCGACTATGCCTTCCACCTCATCGTCAGCGACCCCAGCCCGGCCGTGCTGGGACAGGAGCTGCCGGCGCTGATCCGGCGCGGCCATGCCAGCCTCAAGGTCTACATGACCTACGAGGCGCTCCACCTCTCGGACAGGCAGATCCTCGACGTGTTCGAGGTCGCCAAGCGGGAGAAGGCCATCGTCCTCATCCACGCCGAGAACCACGAGATCATCGGCTGGCTCGCCACCCGGCTCGAAGCGGAGGGGCGCACCGCGCCGCGCGAGCACGCGGCGTCGCGGCCCCTGCCGGTGGAGCGCGAGGCCACCCACCGGGCCGTGACCCTGGCCGAGATCGCCGAGGTGCCGCTGGTGATCGTGCACATCTCCGGCGGCGACCCGCTCGAGGAGGTGCGGCGCGCCAGGGCCCGCGGCTTCACCGTGATCGCCGAGACCTGCCCGCAATATCTCCGGCTGACGGCGGAGGATCTCGACCTGCCCGACATGGCGGGCGCCAAGGCGATGTGCAGCCCGCCGCCGCGCGATGCGGCCGCCCAGGCAAGCCTCTGGCGCGGCATCGAGGACGGCACCATCGACATCGTCAATTCCGATCACGCGCCCTACCGCTTCGATGCGGCGGGCAAGCTGCGAGCCGGGCCGCGGGCGCCGTTCCGCAAGGTCGCCAACGGCATTCCCGGCCTGGAGACGCGCCTGCCCATCCTGTTCAGCGAGGGCGTCGTCGGCGGGCGCATCGACCTGCAGCGCTTCGTGGCGCTCACCGCCCGCAACAATGCCAGGCTCTACGGCCTTTCCCGCAAGGGCACGATCGCGGTCGGCGCCGATGCCGACATCGCCATCTGGGATCCCGAGCGGCGGCTGACCATCCGCAACGAGCGGCTGCACCACAATGTCGACTACACGCCCTTCGAAGGGATGGCGGTGCAGGGCTGGCCTGAAACCATCCTGAGCCGCGGCGAGATCGTCGTCGAGGCCGGCGCGCTGAAGGGAGTGCCCGGACGCGGCCGCTTCCTGGAGCAGACGACGTCGTCGGCCTATCGCCGCGAGAGGGGGGAGCGGTCATGGATCTAG
PROTEIN sequence
Length: 480
MTYDLVIRGGTIATASDVGKADVGIRDGRIVSIADRLTGGDVTLDATGRLVLPGGIDAHCHLDQPQAPGLASAGAVMADGFRSGSISAAFGGTTTIVPFCVQHRGESLLAAVEDYHRRARGEAVIDYAFHLIVSDPSPAVLGQELPALIRRGHASLKVYMTYEALHLSDRQILDVFEVAKREKAIVLIHAENHEIIGWLATRLEAEGRTAPREHAASRPLPVEREATHRAVTLAEIAEVPLVIVHISGGDPLEEVRRARARGFTVIAETCPQYLRLTAEDLDLPDMAGAKAMCSPPPRDAAAQASLWRGIEDGTIDIVNSDHAPYRFDAAGKLRAGPRAPFRKVANGIPGLETRLPILFSEGVVGGRIDLQRFVALTARNNARLYGLSRKGTIAVGADADIAIWDPERRLTIRNERLHHNVDYTPFEGMAVQGWPETILSRGEIVVEAGALKGVPGRGRFLEQTTSSAYRRERGERSWI*