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berkeley_reactor_200306_biofilm_scaffold_12255_98

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 102415..103176

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AHK05017.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AHK05017.1};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 253.0
  • Bit_score: 356
  • Evalue 2.50e-95
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X2R0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 270.0
  • Bit_score: 287
  • Evalue 1.30e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 253.0
  • Bit_score: 356
  • Evalue 5.00e-96

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGATCTAGGGATCGCCGGCAGGCGCGCGCTGGTGCTGGGCGGGAACCGGGGCATGGGCCTCGCGATCGCCAAGGCGCTGCATGCGGAGGGGGCCGAGCTCGCCATCGCCGCCCGCGACGAAGCCGCGCTCATCGCCGCCGCCCGCGAGCTGCGCGGCGCCCGGGCCTTCCGGCTCGACCTCGGCGATGCGCAGGCCCTGCCCGGCTTCGCGGGCGAGGTCGGCGCCATCGACATCCTGGTCAACAACACCGGCGGACCGCCTTATGGCGGCGCCATCGGGCGCGAGCTCGCGGCGTGGGAGGAGAGCTTCCGGGCGATGATGCTGTCGGTCATCGGCCTGACCGACCTGTTCCTCCCGGCCATGCGCCGCGCCGGCTGGGGCCGCATCCTCACCCTGGTCAGCACCGGCGCGGTCCAGCCGATCCCGGTGCTCGGCATCTCCAACACCCTCAGGGCCGGGCTGATCGCCTGGTCGAAATCCCTGGCGGCCGACGTCGCCAGGGACGGGGTGACGGCGAACGTCCTGATGCCGGGGCGCATCGCCACCGAGCGCGTCCGCCTGACGGACATCGCCGCGGCCGAGCGCGAGGGCGTCGCGGTCGAGGAGATCGAGCGGCGCTCGTGGCAGCAGATCCCGGTGGGACGCTACGGCCGGGCCGAGGAGGTCGCAGCCATGGCGGCCTTCGCCTGCAGCGATATCGCGAGCTACGTGACCGGCAGCGTCCTGCGCGTCGACGGGGGCTATGTGCGTCATGTCTGA
PROTEIN sequence
Length: 254
MDLGIAGRRALVLGGNRGMGLAIAKALHAEGAELAIAARDEAALIAAARELRGARAFRLDLGDAQALPGFAGEVGAIDILVNNTGGPPYGGAIGRELAAWEESFRAMMLSVIGLTDLFLPAMRRAGWGRILTLVSTGAVQPIPVLGISNTLRAGLIAWSKSLAADVARDGVTANVLMPGRIATERVRLTDIAAAEREGVAVEEIERRSWQQIPVGRYGRAEEVAAMAAFACSDIASYVTGSVLRVDGGYVRHV*