ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_101

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 104385..105239

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037E3E39 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 258.0
  • Bit_score: 360
  • Evalue 1.40e-96
nitrate ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 272.0
  • Bit_score: 419
  • Evalue 7.00e-115
Hydroxymethylpyrimidine ABC transporter, ATPase component {ECO:0000313|EMBL:AHK05020.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 272.0
  • Bit_score: 419
  • Evalue 3.50e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGGAGCGCCGCCGCAGTCGAGCCCGCCACCGCTCTCGCCTCGACGCGCGAGCGCATGGTCCAGCTGGAGGAGGCCACGGTGCGCTTTCCCGGCCGCGACACCGCCTTCCTCGCCCTGGACAGGACGAGCCTTGCGGTCGATGCCGGCGATTTCGTCGCCATGGTCGGGCCGTCGGGATGCGGCAAGTCGACGATCCTGAAGCTGGTCGCCGGCCTGCTCCGCCCCACCGAGGGCCAGGTGTTCGTGGCCGGCCGCGAAGTCGCGGCGCGGTCGGTGGGCGTCGGCATGGCGTTCCAGAATCCGACCATGCTGCCCTGGCTCAGCATCCGCCAGAACGTGATGCTGCCGCTCAAGATCGTCGCGCCCTACAGGGCTTCCTACCGCGCGAAGAAGCATACCGAGTACCGCGACCGCGCCGAGGCGCTCCTGGCCAAGGTGGGGCTCGCCGGCTTCGGCGACCACAAGCCCTGGCAATTGTCGGGCGGCATGCTGCAGCGGGCCAATCTGTGCCGCGCCCTGATCCACGAGCCGAAGCTCCTGATGCTGGACGAGCCGTTCGGAGCCCTCGACCAGTTCACCCGCGAGGAACTGTGGTCGATCCTGCAGGCGCTGTGGATGGACGGGCGGCCCACGGTGTTCCTGGTGACGCACGATCTGCGGGAGGCCGCCTTCCTGGCGACGCGCATCCTGGTGATGAGCGCCCGGCCGGGCCGCGTCACCGAGGATCGCGCGGTGCCGTTCGCCCGGCCGCGGACCCTCGACACCACCTACGAGGACCGCTTCACGGCGCTGACCCACGATCTCAGGCAGCTGATCGCAGCGGCGCGGCAGGGCGAAGGAGCACGGCCGTGA
PROTEIN sequence
Length: 285
MRSAAAVEPATALASTRERMVQLEEATVRFPGRDTAFLALDRTSLAVDAGDFVAMVGPSGCGKSTILKLVAGLLRPTEGQVFVAGREVAARSVGVGMAFQNPTMLPWLSIRQNVMLPLKIVAPYRASYRAKKHTEYRDRAEALLAKVGLAGFGDHKPWQLSGGMLQRANLCRALIHEPKLLMLDEPFGALDQFTREELWSILQALWMDGRPTVFLVTHDLREAAFLATRILVMSARPGRVTEDRAVPFARPRTLDTTYEDRFTALTHDLRQLIAAARQGEGARP*