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berkeley_reactor_200306_biofilm_scaffold_12255_108

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(110867..111886)

Top 3 Functional Annotations

Value Algorithm Source
Alginate lyase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985B6_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 337.0
  • Bit_score: 527
  • Evalue 5.90e-147
alginate lyase similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 337.0
  • Bit_score: 527
  • Evalue 1.70e-147
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:ETA72133.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 337.0
  • Bit_score: 527
  • Evalue 8.30e-147

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGCGCGCCGTCGGTTTTGAGAACCCGGGTCCGATCGACAACCCCGACTCCCTGGTCGACATCGAGCTGCCGAAGCCGGAGCCCCGGGGGCACGACCTGCTCGTCGAGGTCCGCGCCGTCTCGGTCAACCCGGTCGACACCAAGATGCGCGTGCGCGTGAAGCCCGAGCCCGGCGCCTGGCAGGTGCTCGGCTGGGACGCGGCCGGCACCGTCGCCGCCGTCGGCCCGGACGTGACGCGCTTCAGGCCGGGCGATGCCGTGTTCTATGCCGGCGCCATCGGCCGCCCCGGCACCGATGCCGAGTTCCATCTCGTCGACGAGCGCATCGTCGGGCACAAGCCCGCCTCGCTCGACTGGGCGCCGGCCGCGGCCCTGCCGCTCACCGCCATCACCGCCTGGGAGGCGCTGTTCGACCGCCTCGACGTGCGCAAGCCGGTGCCGGGCGCCGAGCCCGCCATCCTGATCGTCGGCGGCGCCGGCGGCGTCGGCTCGATCGCCGTCCAGCTGGCGCGCCGGCTGACCAGCCTCACCGTGATCGCCACCGCCTCCCGGCCGGAGACGCAGGACTGGGTGCGCGATCTCGGCGCCCATCACGTCGTCGACCATTCCCGCCCGCTGGCGGCCGAGGTCGCGGCGCTCGGCATCGGCGCGCCCGGCTTCGTGTTCTCGACCACCAACACCGGCCGGCACCTCGCCGAGGTGGCCGAGCTGATCGCGCCCCAGGGCCGCTTCGCCGTCATCGACGATCCGGCGACGCTCGACATCAACCCGTTCAAGCGCAAGAGCGTGTCGGTGCACTGGGAGCTGATGTTCACCCGCTCGCTGTTCCAGACCGCCGACATGGCGGCGCAGGGCGCGCTGCTCGACGACGTCGCCCGCCTGGTCGACGCCGGCACGCTGCGCACCACCTTCGGCGAGCATTTCGGGCCGATCAATGCCGCCAACCTCAAGCGGGCCCATGCCCTGATCGAGAGCGGCCGGGCCAAGGGCAAGATCGTGCTCGAAGGCTTCGGCGCCTGA
PROTEIN sequence
Length: 340
MRAVGFENPGPIDNPDSLVDIELPKPEPRGHDLLVEVRAVSVNPVDTKMRVRVKPEPGAWQVLGWDAAGTVAAVGPDVTRFRPGDAVFYAGAIGRPGTDAEFHLVDERIVGHKPASLDWAPAAALPLTAITAWEALFDRLDVRKPVPGAEPAILIVGGAGGVGSIAVQLARRLTSLTVIATASRPETQDWVRDLGAHHVVDHSRPLAAEVAALGIGAPGFVFSTTNTGRHLAEVAELIAPQGRFAVIDDPATLDINPFKRKSVSVHWELMFTRSLFQTADMAAQGALLDDVARLVDAGTLRTTFGEHFGPINAANLKRAHALIESGRAKGKIVLEGFGA*