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berkeley_reactor_200306_biofilm_scaffold_12255_109

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 111988..112356

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ET79_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 113.0
  • Bit_score: 189
  • Evalue 1.10e-45
HxlR-like helix-turn-helix family protein {ECO:0000313|EMBL:AID29021.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 113.0
  • Bit_score: 190
  • Evalue 1.10e-45
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 113.0
  • Bit_score: 189
  • Evalue 3.00e-46

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGCCGCGCATCCGCCACAAGAGCCTCGACTGCAGCCCGGGCTGCGCCGTCGAAGGCGCGCTCGGGGTCATCGGCGGCAAGTGGAAGGGCGTCGTGCTCTACCACCTGTTCGAGGGCACGCTGCGCTTCAACGAGATCCGCCGGCGCCTGCCGAACGTGACGCAGCGGATGCTCACCAACCAGCTGCGCGAATTGGAGCGGGACGGCCTGATCCTGCGCAAGGTCTTCGCCGAGGTGCCGCCGAAGGTGGAATACAGCCTCTCGGAGCGCGGCCGCAGCCTGGAGGCGGTCATGACGGCGCTCAAGGCCTGGGGCGACGCCCATGTCGTGCTGGCACCGGCCGGCGAGGATGGTCGCCGGGCGGCCTGA
PROTEIN sequence
Length: 123
MPRIRHKSLDCSPGCAVEGALGVIGGKWKGVVLYHLFEGTLRFNEIRRRLPNVTQRMLTNQLRELERDGLILRKVFAEVPPKVEYSLSERGRSLEAVMTALKAWGDAHVVLAPAGEDGRRAA*