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berkeley_reactor_200306_biofilm_scaffold_12255_110

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 112450..113310

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase (EC:1.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 284.0
  • Bit_score: 387
  • Evalue 3.00e-105
Putative short-chain dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMB4_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 284.0
  • Bit_score: 387
  • Evalue 1.10e-104
Short-chain dehydrogenase {ECO:0000313|EMBL:EWY37571.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 277.0
  • Bit_score: 387
  • Evalue 8.70e-105

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGACCCATCCCGCCCTGACGCAAGGCCGCGCCGCGGTCATCACCGGCGCGGCCAGCGGCATCGGCCTCGCCATGGCCGAGGCCCTGGCCCGGCTCGGCATGAAGCTCGCCCTCGCCGACGTCGACGCCGCGGCCCTGGAGAAGGCCGCCGCCGGCGTCGCCACCCTGGCGGCGCAGCCGGCCGACGTGATCGCGGTGCCGACCGATGTCGGCCGCCTCGAAGCGGTCGAGCGGCTCAAGGATGCCGCCTATGGCGCCTTCGGCGAGGTCGCCCTGCTGATGAACAATGCCGGCATCGAGGCGGACGGCCGCCTGTTCGCCCCGCGCGAGAACTGGCAGCGCCTGATCGACGTCAACCTCTGGGGCGTGGTCAACGGCGTCCAGGCCTTCGCGCCGGCGATGATCGCCCAGGGCACGCCCGCGGCGATCGTCAACACCGGCTCCAAGCAGGGCATCACCTGCCCGCCCGGCAACACCGCCTACAACGTCACCAAGGCCGGGGTGAAGGTGGTGACCGAGGCCCTCGCCCACGAGCTGCGCAACACGCCCGGCTGCCGGGTCACCGCCCATCTCCTGGTCCCTGGCTTCACCTTCACCGGCTTCACCCGGGCCCGCGTCACGGAGAAGCCGGCCGGCGCCTGGACGCCGGAGCAGGTGATCGAGTTCGGCCTGGAGGCGATGGGGCGCGGCGAGTTCTACATCCTGTGCCCGGACAACGATGTCACCCGCGCCATGGACGAACGGCGGATCCAATGGGCGGCGGACGACATCATCGCGAACCGGCCGGCGCTGTCGCGCTGGCACCCCGACTTCAAGGATGCCTTCGCCACCTTCATGGACGGCACCGGGCCGGCGCGCTGA
PROTEIN sequence
Length: 287
MTHPALTQGRAAVITGAASGIGLAMAEALARLGMKLALADVDAAALEKAAAGVATLAAQPADVIAVPTDVGRLEAVERLKDAAYGAFGEVALLMNNAGIEADGRLFAPRENWQRLIDVNLWGVVNGVQAFAPAMIAQGTPAAIVNTGSKQGITCPPGNTAYNVTKAGVKVVTEALAHELRNTPGCRVTAHLLVPGFTFTGFTRARVTEKPAGAWTPEQVIEFGLEAMGRGEFYILCPDNDVTRAMDERRIQWAADDIIANRPALSRWHPDFKDAFATFMDGTGPAR*