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berkeley_reactor_200306_biofilm_scaffold_12255_152

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 159621..160211

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035D47E1 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 196.0
  • Bit_score: 322
  • Evalue 2.20e-85
RibD C-terminal domain protein {ECO:0000313|EMBL:AID31609.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 196.0
  • Bit_score: 327
  • Evalue 1.20e-86
bifunctional deaminase-reductase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 193.0
  • Bit_score: 234
  • Evalue 1.70e-59

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGGAAAGATCGTCATCAGCACGAATGTCACACTCGATGGAGTGGTCCAGGACCCGGACGGCGAGGAAGGCTTCGAGCTGGGCGGCTGGTTCCACCAGTTCGTGGGGGGCAAGGACCTCGAAGACTGGACCGCCAACGAAACGGAGGAAGCGCTGGGCGCCGAGGCGCTACTGCTGGGCAGGCGGAGCTTTGAGTGGTTCGCGTCCCGGGCGCCATTGATGGGTGCCCGCGTAGGCCGGAAGTGGGCGGACAGAATGAACCACCTCCCCAAATACGTCGTGTCGTCGACGCTCGAACATCCTCAATGGAGCAACACCACGGTCCTCGGCGGCGATGCGGTCAAGGAGGTTTCGGCGCTGAAGCAGAAGGTGGACGGGGAAATCCTGGTCTACGGCAGCTATCAGCTGGTGCGCACACTGATAGAGCAGAACTTGGCCGACGAAGTGCGGTTGATAGCTTTCCCGGTCGTGCTTGGAGCCGGCCTGCGCATCTTCGACCGGACCAGCGACAAGAGGCAACTGCACCTGGTCGACACACGAAAGATCGGTGACGGCCTTGTGTTCTATGCCTACGAGTTCGAGCCAGGCTGA
PROTEIN sequence
Length: 197
MGKIVISTNVTLDGVVQDPDGEEGFELGGWFHQFVGGKDLEDWTANETEEALGAEALLLGRRSFEWFASRAPLMGARVGRKWADRMNHLPKYVVSSTLEHPQWSNTTVLGGDAVKEVSALKQKVDGEILVYGSYQLVRTLIEQNLADEVRLIAFPVVLGAGLRIFDRTSDKRQLHLVDTRKIGDGLVFYAYEFEPG*