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berkeley_reactor_200306_biofilm_scaffold_5168_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5542..7539

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein C n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQC0_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 662.0
  • Bit_score: 887
  • Evalue 4.40e-255
excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 662.0
  • Bit_score: 887
  • Evalue 1.30e-255
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 662.0
  • Bit_score: 887
  • Evalue 6.20e-255

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1998
ATGGCGGCGCGGAGACATTACCTTCCGGGCATGATCGATTCACCCCGCGACACGGTCGAGGACGGCTTCGAGGAAGCGGCCTCGGCGATTGATTTCGCCTTCGACGAAGCCAGCCTGCCCACCTCGCTGCGGGCCGGCGCGGCGGTGATTCATGCCTTCTGGAAGACGCTGCCGAACGGGCCCGGCGTCTACCGCATGATCGATGCCGAAGGCGCGGTGCTCTATGTCGGCAAGGCACGCTCGCTGAAGAAGCGGGTGGCGAGCTATGCCAGGGGCGTGGCGCCGACGGCGCGCATCGGCCGGATGATCGCGGAAACGGCGGCGATGGAGTTCGTCACCACCGAGACCGAGACCGAGGCGCTGCTGCTCGAGACCAACCTGATCAAGAGCCTGAAGCCGCGCTTCAACGTGCTGATGCGGGACGACAAGTCGTTCCCCTACATCCTCCTGACCGGCGACCATCCGGCGCCGCAGCTGACCAAGCACCGCGGCGCCCGCACCCGCAAGGGCGACTATTTCGGGCCCTTCGCCAGCGTCCTCGCCGTCAACCGCACCATGAACGCGCTGGAGCGCGCCTTTTTGGTGCGCTCCTGCACCGATTCGGTGTTCTCGACCCGCACCCGCCCCTGCCTGCTGCACCAGATCAAGCGCTGCTCGGCGCCGTGCACCGGCGAGATCGGCCCCGAGGCCTACGGCGAGCTGGTGGGCGAGGCGCGCGCCTTCCTGACCGGCAAGTCCAAGGCGATCAAGGAGCGGATGGCGGCCGAGATGCAGGCGGCGGCGGACGAGTTGGAGTTCGAGCGCGCCGCCCGCTACCGCGACCGGCTGGCGGCGCTCTCGGCGATCCAGTCGACCCAGGGCGTCAACCCACAGACCGTGGAGGAGGCCGACGTCTTCGCCATCCACGAGGAGGCCGGGCAGTTCTGCATCGAGGTGTTCTTCTTCCGCACCTACCAGAACTGGGGCAACCGCGCCTATTTCCCCAAGGCGGACAAGACCTTGACCACGCAGGAAGTGCTCGATGCCTTCCTGGCGCAGTTCTACGACGACAAGCCGGCGCCGCGGCTGGTGCTGCTGTCGCACGATGTCGAAGGGGCGGACCTCCTCGGCCAGGCGTTGAGCCTCAAGGCCGGCCACCGCATCGAGGTCTCCAGCCCCAAGCGCGGCGAGAAGCGCGACCTCGTCGAGGCGGCGCTGACCAATGCGCGCGAGGCGCTCGGCCGGCGCCTGGCGGAATCGTCCTCGCAGATCAAGCTGCTGGAAGGGGTGGCCGAGGCCTTCGGGCTGGAGGAGATGCCGCACCGGATCGAGGTCTACGACAACTCGCACATCATGGGCACCAACGCGGTCGGCGGCATGATCGTCGCCGGACCGGACGGCTTCATGAAGACCAGCTACCGCAAGTTCAACATCAAGTCCGAGGAGCTCACCCCGGGCGACGATTTCGGCATGATGCGCGAGGTGCTGCAGCGGCGCTTCTCGCGCCTGCTGAAGGAAGCGCCCCGGGCCGAAACCGGGGCGGAGAAGGAGGGCGAGGCCTCGCCCTGGCCGGACCTGGTGCTGATCGACGGCGGCGCCGGCCAGCTCAAGGTGGCCCGCGAGACCCTGGTCGACCTCGGCATCGAGGACGTGCCGCTGGTCGGCGTCGCCAAGGGGCTCGACCGCGACGCCGGCCGCGAGACCTTCATCATCGAGGGCCGGCCGCCGTTCAAGCTGGCGCCGCGCGACCCCGTGCTCTACTTCGTGCAGCGCCTGCGCGACGAGGCACACCGTTTCGCCATCGGCGCGCACCGGCAGAAGCGCTCGAAGTCGATGCGCGAAGGCGGCCTGCAGGAGATCGGCGGCATCGGCCCGCAGAGGAAGCGCGCCCTGCTCCACCATTTCGGCACGCTGAAGGCGATCTCCCGCGCCTCCCTCGCCGACCTGCAGGGCTGCCCGGGCATCGACGAGCGCACGGCCCGGAAGGTGCACGCCTTTTTCCAGCAGGAGTCGAAGTAG
PROTEIN sequence
Length: 666
MAARRHYLPGMIDSPRDTVEDGFEEAASAIDFAFDEASLPTSLRAGAAVIHAFWKTLPNGPGVYRMIDAEGAVLYVGKARSLKKRVASYARGVAPTARIGRMIAETAAMEFVTTETETEALLLETNLIKSLKPRFNVLMRDDKSFPYILLTGDHPAPQLTKHRGARTRKGDYFGPFASVLAVNRTMNALERAFLVRSCTDSVFSTRTRPCLLHQIKRCSAPCTGEIGPEAYGELVGEARAFLTGKSKAIKERMAAEMQAAADELEFERAARYRDRLAALSAIQSTQGVNPQTVEEADVFAIHEEAGQFCIEVFFFRTYQNWGNRAYFPKADKTLTTQEVLDAFLAQFYDDKPAPRLVLLSHDVEGADLLGQALSLKAGHRIEVSSPKRGEKRDLVEAALTNAREALGRRLAESSSQIKLLEGVAEAFGLEEMPHRIEVYDNSHIMGTNAVGGMIVAGPDGFMKTSYRKFNIKSEELTPGDDFGMMREVLQRRFSRLLKEAPRAETGAEKEGEASPWPDLVLIDGGAGQLKVARETLVDLGIEDVPLVGVAKGLDRDAGRETFIIEGRPPFKLAPRDPVLYFVQRLRDEAHRFAIGAHRQKRSKSMREGGLQEIGGIGPQRKRALLHHFGTLKAISRASLADLQGCPGIDERTARKVHAFFQQESK*