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berkeley_reactor_200306_biofilm_scaffold_4811_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(522..1355)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional repressor allR Negative regulator of allantoin and glyoxylate utilization operons n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZM8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 263.0
  • Bit_score: 222
  • Evalue 4.40e-55
Uncharacterized protein {ECO:0000313|EMBL:KJB93048.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 251.0
  • Bit_score: 229
  • Evalue 5.00e-57
transcriptional repressor IclR similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 272.0
  • Bit_score: 216
  • Evalue 6.80e-54

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCGGACACAGGAGGCCGGGGCGGTGGCGCGGGAGGGGCGATCAGAGGCCCCATCGGAGACGGCGGGCGGCGTGCAGTCGCTGATCCGGGCGCTCTCCATCCTCGACACGCTGGCCGAGAGCGAGGACGGGCTGTCGCTGACTGCGCTGGCCAGGGCGGTCGGCCTGCCGCCTTCGAGTGCACACCGCCTGCTGACCACGCTGCAGCGCAAGCGCTTCGTGCGCTTCGAGCCGGGGGCGATGACCTGGCGGGTCGGCGTGCAGGCCTTCGTGGTCGGCAACGCCTTCGCCCGCTCGCGCGAGGTCGTGCCCTTCGCCATGCCGTTCATGCGCCAGCTGATGGACAAGACCGGCGAGACCGTGAACCTCTACGTGCCGAACGACGGCCAGGCGATCTGCATCGCCCAGGTGCAGAGCCGGCAGGTGATCCGCGCCATCTCCCGGCCGGGCGGCACCGTGCCGCTGCAGCGCTCGGCCGCCGGCAAGGCGATGCTGGCCCGGATGGGCCGGGGCGAGGTGGAGGACATTCTCTCGGCGCATGGCCGCAGGGATCCCGAGGAGGCGTCTGCCGTCGATCCAAGCAAGCTTCGTGCCGAGATCGAGGCGGTGCGTGCGCGCGGCTTCGCCCTCGACGACGAGGAGGTGGCGCCCGGGCTGCGCTGCATCGCCGTGCCGATCCTCGACGAGCACGGCGCTGCCCAGGCGGCGATGTCGATCGCCGGCCCGATCACCCGCCTGACCGACCAGCGCCTGGCGCGCCTCGCCGGGATGGTCGTGGCCGCGGGCGAGGCCGTCACCCGCGAGTTCGGCGGCGGGGGACGGGGCATGCGGTGA
PROTEIN sequence
Length: 278
MRTQEAGAVAREGRSEAPSETAGGVQSLIRALSILDTLAESEDGLSLTALARAVGLPPSSAHRLLTTLQRKRFVRFEPGAMTWRVGVQAFVVGNAFARSREVVPFAMPFMRQLMDKTGETVNLYVPNDGQAICIAQVQSRQVIRAISRPGGTVPLQRSAAGKAMLARMGRGEVEDILSAHGRRDPEEASAVDPSKLRAEIEAVRARGFALDDEEVAPGLRCIAVPILDEHGAAQAAMSIAGPITRLTDQRLARLAGMVVAAGEAVTREFGGGGRGMR*