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berkeley_reactor_200306_biofilm_scaffold_4811_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2758..3765

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized ABC-type transport periplasmic component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICE7_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 335.0
  • Bit_score: 330
  • Evalue 1.10e-87
ABC transporter {ECO:0000313|EMBL:GAN77494.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 332.0
  • Bit_score: 364
  • Evalue 1.60e-97
ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 335.0
  • Bit_score: 330
  • Evalue 3.00e-88

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGACCAAGTTCCCGATACGCCGCCTGGCCGGCCCGGCCGCAATCGCCGTGCTTCTCGCCGGCGGTCTCACGGCCCCCGCCCTGGCGCAGGACAAGGCCGCCATCCTGCTGCCGGGCAGCGCCAACGACCAGAGCTGGAACGCGCTCGGCTATGCCATCCTCAAGAGCCTGGAGCCGCACGGCTTCAAGACCGCCTATTCGGAGAACGACGCCGACGAGGGCGAGGCCCTGCGCGACTACGCCGCCCAGGGCTACGGCATCGTCATGGGCCATTCCGGCCGCTTCGTCTCGGCCATGGAGCAGGTGGCGCCGGACTTTCCCAAGACCCAGTTCATCGCGGTGAGCGGCAACGAGGGCAAGGCGCCCAACGTCATGTCGATCGACTGGAACAACGCCCAGTTCGGCTGCCAGCTCGGCGCCCTCGCCGCGGCGATGAGCAAGACCCACAAGGTCGCCGGCGTCTACGGCCTGCAGGGCGTGCCCAACATCACGGCGCAGGCCGGCGGCTTCCGCATCTGCGCCGCCAAGGCCGGCGCCGCGGTGACCATCCTCTACATCAAGGACATGGAGGATGCGGCCGAGGCCAAGGAGGCGGCGCTCTCGCTGATCGGCCAGGGCGCCGACGTCATCACCGGCAAGCTCAACGCCGCCGAGACCGGCCTGGTCCAGGCGGCCAAGGAGAAGCACGTCTACGTCACCGGCCGCGGCTTCGACCAGACGAAGATCGCGCCCGACCTGGTGCTCACCAACATCGTCGAGGACTGGCCGGGCATGTTCGGCAGCACCGCCGACCAGGTGAAGGCCGGCAAGCTGTTCGGCAGCTTCGTGCAGTACGGCTACGACACCGCCCCGGTCACCGGCGCCGCCCTGCAATATGCCGAGGGCAAGCCGTTCAACCCGGTCGTGCCGGCAGCGGTGGTCAAGGCGCTCGACGACATGGCGGCGGGATTCAAGAGCGGCGCCCTCAAGATCGCGCCGACCGACGCCGACGCGCGCAGCGGCAGCTGA
PROTEIN sequence
Length: 336
MTKFPIRRLAGPAAIAVLLAGGLTAPALAQDKAAILLPGSANDQSWNALGYAILKSLEPHGFKTAYSENDADEGEALRDYAAQGYGIVMGHSGRFVSAMEQVAPDFPKTQFIAVSGNEGKAPNVMSIDWNNAQFGCQLGALAAAMSKTHKVAGVYGLQGVPNITAQAGGFRICAAKAGAAVTILYIKDMEDAAEAKEAALSLIGQGADVITGKLNAAETGLVQAAKEKHVYVTGRGFDQTKIAPDLVLTNIVEDWPGMFGSTADQVKAGKLFGSFVQYGYDTAPVTGAALQYAEGKPFNPVVPAAVVKALDDMAAGFKSGALKIAPTDADARSGS*