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berkeley_reactor_200306_biofilm_scaffold_12839_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 256..1260

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Ancylobacter sp. FA202 RepID=UPI0003828B7F similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 315.0
  • Bit_score: 360
  • Evalue 1.20e-96
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 334.0
  • Bit_score: 353
  • Evalue 5.60e-95
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADH91564.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 334.0
  • Bit_score: 353
  • Evalue 2.80e-94

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGTCGCGCGCCACGGTGTCGCGCGCCTTCGGCCAGCCGCATCTGCTCAGCCGCGAGACGGTGGAGCTGGTGCAGGCGGTGGCCGCGCGCCTGGGCTACGTGCCCAACCACACCGCACGGGCCCTCAGCACCGGGCGGGCCGGCAACATCGCCCTCGTCGTGCCCGACATCACCAACCCCTTCTTCGCGGCGCTGATGCGCGGCGCCCAGGCCAAGGCCCGCGACGCCGGCTTTGCCACCTTCCTCGGCGATTCCGACGAGACGCCGGAGCTGGAGGACATGCTCCTCGCCAAGCTCTCGGCCCAGGTCGAGGGCTTCATCCTCGCCTCCTCGCGCCTGTCGCGCGAGCGCATCCTGCACCATGCCCAGCGCCGGCCCTTCGTGCTGATCAACCGCGACGTGCCGAAGCTGCCGCGCCTGCTGATCGACACCGGCCCGAGCTATGCCCGCGCGGTGGAGCACCTCGCCGGCCTCGGCCACCGCGCCATCGCCTATCTCGCCGGGCCGACCCTGTCCTGGTCCAACCGCCAGCGCCACAAGGCCAGCCTCGAGGCCGCCCGCCGCCTCGGCCTCGCCCTCACCCGCATCCCGACCTCGCGGCCGAGCTTCGAGGCCGGCCGAGCCGCCACCGACGCGTTGCTGGCCAGCGGCGCCACGGCGGCGCTGGCCTTCGACGACGTCATGGCCCAGGGCGTGATGGCGGGCCTCGCCGCCCGCGGCCTCTCGGTGCCGGGCGACATCAGCCTGATCGGCTGCGACGGCGTGCTCGCCACCACCACCTACCCGCCGCTGACCTCGGTGACGGCGCACTGCACCCGGGCCGGCGAGGAGGCCGTCGACCTGCTGCTCGACGTGCTCGACGGCAAGGCGCCGCGCGACCGGACGCTGAATCTGCCGACCGAGCTGGTGATCCGCGCCACCACGGCCGCGCCGGCCTCAGCCGCTTCTCTCGGCCTGCCCGGCATCGAGCCCGGCAGCGCCGCTGCACTCCCGGAGCCGTTCTGA
PROTEIN sequence
Length: 335
VSRATVSRAFGQPHLLSRETVELVQAVAARLGYVPNHTARALSTGRAGNIALVVPDITNPFFAALMRGAQAKARDAGFATFLGDSDETPELEDMLLAKLSAQVEGFILASSRLSRERILHHAQRRPFVLINRDVPKLPRLLIDTGPSYARAVEHLAGLGHRAIAYLAGPTLSWSNRQRHKASLEAARRLGLALTRIPTSRPSFEAGRAATDALLASGATAALAFDDVMAQGVMAGLAARGLSVPGDISLIGCDGVLATTTYPPLTSVTAHCTRAGEEAVDLLLDVLDGKAPRDRTLNLPTELVIRATTAAPASAASLGLPGIEPGSAAALPEPF*