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berkeley_reactor_200306_biofilm_scaffold_12839_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2083..3270

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00035F890B similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 386.0
  • Bit_score: 632
  • Evalue 1.50e-178
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 386.0
  • Bit_score: 620
  • Evalue 1.70e-175
Extracellular solute-binding protein {ECO:0000313|EMBL:ADH91562.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 386.0
  • Bit_score: 620
  • Evalue 8.40e-175

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGACGACGCGACGCACTGCCATCCTCTCCATCCTGACCGCGGGCCTCGCCCTCGCGGCGCTGCCGCAGCTCGCGGCGGCGCAGGACTTCCCCAAGCTGAAGCAGCCGCTGGTCATCAGCGTCATCGACGTCGCCGGCGACCTGCAGCTCAGCCAGCCGGCGCTGGAGAAGTTCGCCGCCACTCATCCCGACCTCGTGTCGAAATTCGTCTTCACCCAGGCGACGGCGCCCGAGCTCGCCGGCAAGCTCCAGGCCCAGCAGGCGGCCGGCCGGGTCGACATCGACTTCGTGCTCACCGGCAACGACGCGCTGGCCGCCGGCATGGAGCAGGGCCTGTGGACCGAGATCCTGCCGAAATACGAGGCCAAGTTCCCGGACCTGGAGAAGATCTACCTGCCCGGCGCCTGGGCCATGCAGAAGATGGCGCGGGGCCAGGCCTTCGTCGACGACTGGTATCCCTCCGGCCCGCTGCTCGAATATGCGCCGGACCGGGTCAAGGAGGTGCCCGACACCGCCGAGAAGCTGCTCGCCTGGTGCAAGGCCAATCCCGGCCGCTTCATGTATGCCCGCCCGGCCAATTCCGGCCCGGGCCGCACCTTCGTGATGGGCCTGCCCTATCTCCTCGGCGACAAGGACCCGATGGACCCGGTGAAGGGCTGGGACAAGACCTGGGCCTACCTGAAGGAGCTGGACGGCTGCATCGAGTACTATCCCGGCGGCACCACCGCGACGATGAAGGAGCTCGGCGAGGGCAGCCGCGACATCATCGCCACCACCACGGGCTGGGACGTCAACCCGCGCTATCTCGGCATCGTGCCGGAGGAATACAAGGTGGCGACGCTGAAGGGCTTCCACTGGGTGGGCGACGCCAACTATGTTGCCATCCCCAAGGGGGTCTCGGAGGAGAAGCTCGGCGTGCTGCTGGAGCTTATCGCCTTCATCCTGAAGCCGGAGCAGCAGGCCTTCATGTACGACCACGGCTACATGTATCCCGGCCCGGCGATCAAGGACGTGCCGATCGAGATGGCCCCGCCGGAGAGCCAGGACACGTTCAAGCGCTTCGGCCGGCCGGAATATGCGGCGATGATCGCCGACAACCCGGTCGAGCCGCCGCTCGATGCCAAGCCGCTGGTCGCCATGTTCGAGAAATGGGACCGCGACATCGGCGGCGCCAAGCTGAAGAAGTAG
PROTEIN sequence
Length: 396
MTTRRTAILSILTAGLALAALPQLAAAQDFPKLKQPLVISVIDVAGDLQLSQPALEKFAATHPDLVSKFVFTQATAPELAGKLQAQQAAGRVDIDFVLTGNDALAAGMEQGLWTEILPKYEAKFPDLEKIYLPGAWAMQKMARGQAFVDDWYPSGPLLEYAPDRVKEVPDTAEKLLAWCKANPGRFMYARPANSGPGRTFVMGLPYLLGDKDPMDPVKGWDKTWAYLKELDGCIEYYPGGTTATMKELGEGSRDIIATTTGWDVNPRYLGIVPEEYKVATLKGFHWVGDANYVAIPKGVSEEKLGVLLELIAFILKPEQQAFMYDHGYMYPGPAIKDVPIEMAPPESQDTFKRFGRPEYAAMIADNPVEPPLDAKPLVAMFEKWDRDIGGAKLKK*