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berkeley_reactor_200306_biofilm_scaffold_12839_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5296..6129

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HMN9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 274.0
  • Bit_score: 447
  • Evalue 8.30e-123
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJM99977.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 274.0
  • Bit_score: 447
  • Evalue 1.20e-122
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 274.0
  • Bit_score: 442
  • Evalue 7.60e-122

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGATCCGCGACACCACGACCGGCGCCCGGCTCTGGTCCACCCTGGTCTGGGTCCTGACCGGCTTCTTCGTGCTCAACGTCGCCGCGATGATGGCGACGGTCGTGACGAGCTCGTTCTCGACCCGCTGGCTGCAGTCCTGGCTGCCGGCCGGCTACACCACGCGCTGGTACCTCGCCGCGTGGCGCGAGTTCCAGCTCGGCGACGTGCTGCTGACGACCTTCGAGGTGGTGGGAGCCGTGGTCCTGCTCTCCGGCCTGATCGGCGTGCCCGCCGCCTATGCCATGGCCCGGCGCGACTTCTCCGGCAAGCGCCTGGTGCTGCTGATCTTCCTGCTGCCGCTCCTGGTGCCGCCGATGACCTTCGGCATCCCGCTCGCCACCGTGCTCTACCAGCTCGGGCTCGGCGGCACCTTCTGGGGCGTGGTGCTGGCCAATCTCGTGCCCTCGGTGCCCTTCGTCATCATGGTGATGATCCCCTTCATCGAGCAGATCGACCCGAAGGTGGAGGCGGCGGCGCGGGTGTTCGGCGCCGGCACGCTGCAGCTCTTCCGCCACGTGCTGATCCCGATGCTGACGCCGGGCGTGCTGGCGGCGCTGCTGCTGGTGCTGGTGCGCACCATCGCCATGTTCGAACTGACCTTCCTCACCGCCGGCCCGACCAGCCAGACCCTGGTGGTGGCGCTCTACTATTCCGTGTTCGCCGCCGGCGTGCGCGCCGTGCAGTCGATCGACGCCATGGCGGTGGTCTACACCGCCACCACCCTGGTCTGGCTGCTGATCGCCCTGCGCTTCGTCAACCCGACCCAGATCGTCGGCCGCGGCGGGCGGCGGTGA
PROTEIN sequence
Length: 278
VIRDTTTGARLWSTLVWVLTGFFVLNVAAMMATVVTSSFSTRWLQSWLPAGYTTRWYLAAWREFQLGDVLLTTFEVVGAVVLLSGLIGVPAAYAMARRDFSGKRLVLLIFLLPLLVPPMTFGIPLATVLYQLGLGGTFWGVVLANLVPSVPFVIMVMIPFIEQIDPKVEAAARVFGAGTLQLFRHVLIPMLTPGVLAALLLVLVRTIAMFELTFLTAGPTSQTLVVALYYSVFAAGVRAVQSIDAMAVVYTATTLVWLLIALRFVNPTQIVGRGGRR*