ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12839_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 8426..9475

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter, substrate-binding protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6I4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 349.0
  • Bit_score: 603
  • Evalue 1.10e-169
Sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:CCV12095.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 349.0
  • Bit_score: 603
  • Evalue 1.60e-169
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 348.0
  • Bit_score: 512
  • Evalue 7.50e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAAGCTTTCACTCCGAACGGCCGCGAGCGCCCTGTGCCTCGGCCTGCTCACAGCGCTCGCCGCGACCACGGCGGCCGAGGCCGCGGCCAAGTGCATCAAGGGCGACCGCAAGCCGCCCTACACCATCGGCTGGGCCAACATCTATTCGGTGCCGACCTGGATGAAGCAGACCCAGGGCACCATCGAGGCCGAGGTCGCCGACCTCAAGAAGCAGGGCCTCGTCGACAAGCTGGTGGTCACGGACGCCCAGGGCGACGCCAACATCCAGATCCAGCAGATCCAGTCGATGATCGACGCCAATGTCGACGCCATCATCCTGATCGCCGGCTCCTCCACCGCCCCCGCCCGCGTCATCGCCGACGCCTGCGCCAAGGGCATCGCCATCATCAATTTCGACAGCCTGGTCGACACCGACCAGGTCACCGCCAAGATCAACACCGATTCGTCCCAATGGGGCGCCGGCGCCGCCAAGTTCCTGATCGACGCGATCGGCGGCAAGGGCAAGATCATCGTCCTCAACGGCCCGGCCGGCGTCTCCGTCTCCGACGACCGCCGCAAGGGCGCCGAGCCGGTGCTGAAGGCCCATCCCGACGTGCAGATCCTGGCCGAGACCAACACCGCCTACAACACCGCGCCGGCCCAGGAGGCGGTGACCAGCCTGCTCTTCGCCAATCCCGAGATCGACGGCGTGCTCTCCCTCGGCGGCGCCCTCTCCGCCGGCGCGGTCCTCGCCATGGACAAGCAGGGCCGGGCGATGGTGCCGATCACCGGCGAGAACGCCCGCCAGTTCCTCGAATTGTGGAAGGAGAAGGACCTCAAGGCCTGGGCCACCATGCAGCCCAACTGGCTCGGCGCCTTCGCGACCTATGTCGCGGTCCAGGCGCTTTCCGGCAAGGACGTGCCCGCCTTCGTCAAGATCCCGCTGCCGGTGATCGACAATTCCAACATCGACCAGTACCTGGCCCGCGCCAAGGACTTCCCGGCCGACGGCTATATCTTCTCGCCCTACGACCAGGCGCTGTTCGAGAAGCTGCTGGCCGGAAAGTAA
PROTEIN sequence
Length: 350
MKLSLRTAASALCLGLLTALAATTAAEAAAKCIKGDRKPPYTIGWANIYSVPTWMKQTQGTIEAEVADLKKQGLVDKLVVTDAQGDANIQIQQIQSMIDANVDAIILIAGSSTAPARVIADACAKGIAIINFDSLVDTDQVTAKINTDSSQWGAGAAKFLIDAIGGKGKIIVLNGPAGVSVSDDRRKGAEPVLKAHPDVQILAETNTAYNTAPAQEAVTSLLFANPEIDGVLSLGGALSAGAVLAMDKQGRAMVPITGENARQFLELWKEKDLKAWATMQPNWLGAFATYVAVQALSGKDVPAFVKIPLPVIDNSNIDQYLARAKDFPADGYIFSPYDQALFEKLLAGK*