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berkeley_reactor_200306_biofilm_scaffold_12839_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21754..22629)

Top 3 Functional Annotations

Value Algorithm Source
Putative spermidine/putrescine transport system permease, componentof ATP-transporter system n=1 Tax=uncultured bacterium RepID=K2AI81_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 269.0
  • Bit_score: 354
  • Evalue 7.70e-95
spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 269.0
  • Bit_score: 307
  • Evalue 2.30e-81
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 277.0
  • Bit_score: 374
  • Evalue 1.30e-100

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Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGACAACACGCGTTCGGCCGCCTCCTGATGAAGATCTTCGTGGCGGTCTTCCTGTTCTACATGCTGATGCCGCTGGTGATCATGGGCGGCGCGGCGCTGAACAATTCGCGCTTCCCCTCGATCTATCCCTGGGTCGGCTTCACCGGCCGCTGGTTCGAGGACCTGTGGGCCGACACGCGGATGTGGACGGCGATCCGCAACACCCTGCTGGTGGCGCTCTCGGTGGTGGCGCTCGCCGTGCCGATCGGCACGGCGGCGGCCATCCTGATCAACGGCATCGATGCCCGGGCGCGCGGCTTCCTCTACGGCGTGATGATCGCGCCGATCCTGACGCCGGGCGTGGTGATCGGCATCTCCACCCTGCTGTTTTGGAACGCGTTCAACGCTCCCGCGGGCCTCTGGCTCTCGGTGCTGGGCCAGGTCTCCTTCATCGCCGCCTATGTCATGCTGCTGGTGCTGGCGCGGCTGCAGAGCTTCGATCCCCTCCTGGAGGAGGCGGCGCTCGACCTCGGCGCCAGCCACACCCAGGTGATGCGCCGCATCGTGGTGCCGCATCTCTACCCCGCCATCGGCGCCGGGGCGCTGATCGCCTTCTTCCAGTCGGTGGAGAATTTCAACGTCACCCTGTTCACCAAGGGCAATTCGGACACGCTCACCGTCTATGTTTTCTCCAAGACGCGCTCGGGCATCACGCCGACCATCAACGCGCTGGCGCTCAGCCTGATCGCGCTGACCGTGATCGGCGCCATCGTCTACGAGATCACCCGCCGCCGGGCGGAGAGGCGGGCCATGGAGGAAGCGGCGGCCGCGGCCGCCGCCGAGGACGCCGACCTCGCCGCTGCCGGGCCGCTGGCGACGCCGGCGGCGGCGTAG
PROTEIN sequence
Length: 292
MRQHAFGRLLMKIFVAVFLFYMLMPLVIMGGAALNNSRFPSIYPWVGFTGRWFEDLWADTRMWTAIRNTLLVALSVVALAVPIGTAAAILINGIDARARGFLYGVMIAPILTPGVVIGISTLLFWNAFNAPAGLWLSVLGQVSFIAAYVMLLVLARLQSFDPLLEEAALDLGASHTQVMRRIVVPHLYPAIGAGALIAFFQSVENFNVTLFTKGNSDTLTVYVFSKTRSGITPTINALALSLIALTVIGAIVYEITRRRAERRAMEEAAAAAAAEDADLAAAGPLATPAAA*