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berkeley_reactor_200306_biofilm_scaffold_16012_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 8751..9704

Top 3 Functional Annotations

Value Algorithm Source
D-ribose transporter subunit membrane component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7S5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 319.0
  • Bit_score: 449
  • Evalue 1.90e-123
D-ribose transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCV12238.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 319.0
  • Bit_score: 449
  • Evalue 2.70e-123
rbsCch4; ribose ABC transporter similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 309.0
  • Bit_score: 425
  • Evalue 1.10e-116

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGAAGCGTCTGTCTTCCTGGTATGCGTCGCTGGGCGCGGTACGTGGGCCGCTGATCGGCCTGGTGGCGCTGTGCCTGGCGCTGAGCCTGTCCACCGACACCTTCTTCACCACGCGCAACGTCCTCAACGTCATGGACCAGATCACCGTCCTCGGCGTCATGGCCATCGGCATGACGCTGGTGATTCTGATCGGCGGCATCGACCTGTCGGTCGGCTCGGTGCTGGCGCTGTCGATGATGGTGATGGGCTATCTCGCCAACGAGATGGGCCTGCCCTTCGGCCTCGCCATCGTCGTCGCCATCCTGGTCTCGGCCCTGTGCGGCCTGGTCTCGGGCCTGATGATCACCGAGGCGGGGCTGCCGCCCTTCATCGCCACGCTGGCGATGATGTCGGTGGCCCGCGGCATCGCCAGCATCATCACCGACGGCCAGCAGATCGTCGGCTTCCCCGACTGGTTCACCGACCTCGCCATCACCCGCCACTTTTCGGTCCTGTCGGTGACGGTGGCCGTCATGGTGGTGCTGTTCGCCATCGCCTGGATCGTGCTGCGCTACCGCGCCGCCGGCCGCAACCTCTATGCCGTGGGCGGCAGCGTCGAGGTGGCGCGCCTCGCCGGCATCAAGGTGCAGCGCACCACCAACTGGGTCTACACCCTGTGCGGCGCGCTGGCGGGCCTGGCCGGGGTCATCCTGGCGGCGCGGCTCGACTCGGCCCAGCCGAGCTCGGGCCTGGGCTACGAGCTCGACACCATCGCCGCCGTCGTGATCGGCGGCACCAGCCTGTCCGGCGGCGTCGGCGGCATCGGCGGCACCATCGTCGGCGTGCTGATCATCGGCTTCCTGCGCAACGGGCTCAACCTGCTGCGCGTCTCCCCCTTCGTCCAGCAGATCGTCATCGGCGTCGTCATCGCCCTGGCCGTGGCCGGCGATACCTGGCGCCGGCGCATGCGATGA
PROTEIN sequence
Length: 318
MKRLSSWYASLGAVRGPLIGLVALCLALSLSTDTFFTTRNVLNVMDQITVLGVMAIGMTLVILIGGIDLSVGSVLALSMMVMGYLANEMGLPFGLAIVVAILVSALCGLVSGLMITEAGLPPFIATLAMMSVARGIASIITDGQQIVGFPDWFTDLAITRHFSVLSVTVAVMVVLFAIAWIVLRYRAAGRNLYAVGGSVEVARLAGIKVQRTTNWVYTLCGALAGLAGVILAARLDSAQPSSGLGYELDTIAAVVIGGTSLSGGVGGIGGTIVGVLIIGFLRNGLNLLRVSPFVQQIVIGVVIALAVAGDTWRRRMR*