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berkeley_reactor_200306_biofilm_scaffold_16012_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11125..12633

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE6515 related cluster n=1 Tax=unknown RepID=UPI0003CE6515 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 502.0
  • Bit_score: 671
  • Evalue 4.90e-190
Sugar ABC transporter {ECO:0000313|EMBL:KGM32186.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 502.0
  • Bit_score: 680
  • Evalue 1.50e-192
ABC transporter nucleotide binding/ATPase similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 505.0
  • Bit_score: 646
  • Evalue 3.70e-183

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGTCCGTCCCGCCTGCCGCGACCGGAAACGCCCCGACGGGCCTTTCCATCCGCGGCATCAAGAAATCCTTCGGCGACGTCGACGTGCTGTTCGGCATCGACCTCGACGTTCGGCCGGGCGAGGTGGTGGCGCTCCTGGGCGAGAACGGCGCCGGCAAGTCGACGCTCTCCGGCATCATCGCCGGCGCGGTGCGCCCCTCCGCCGGCACGATGACCTGGAACGGCGCGCCCTATGCGCCGCACCAGCCGGGCGACGCCATCGCCGCCGGCATCGGCATGATCCACCAGGAGATGCGCCTCCTGCCGCACCTCTCCATCGCCGAGAACGTCTTCGTCGGCCGGCTGCCGCTGAAGGGCGGGCGGATCGATCGCGACACCATGAACCGGCTCGCCAGCGCGCAGTTGCGCCGGCTCGGCCTCGACGTCCCGCCCACCCGGCTGGTCGGCACCCTGACCATCGCCGCCCAGCAGCAGGTCGAGATCGCCAAGGCGCTGGTGCTGCAGGCCAAGCTCCTGATCCTCGACGAGCCGACGGCAGCCCTCGGCGGGCACGAGACCGACCTCCTGTTCGAGCAGATCAACCGCCTCAAGGCCGAAGGCTATTCGTTCATCTACATCTCGCACCGGCTGGAGGAGATCGCCCGCATCGCCGACCGCGTCGTCGTGCTGCGCGACGGCCATCTCGTCGCCACCCACGACACGGCGCAGCTGCCGGTCCGCACCTTCGTCGAGGCCATGGTCGGGCGCAGCGTCGAGCGCATGTTCCCCGACCTGCCCGCCCCCGGCGGCGACGTCGTCCTGGAGGTGCGCGGCCTGACCTCCGCCCATGGCGCCTTCCGCGATGTCGGCTTCGAGGTGCGCAAGGGCGAGATCCTCGGCTTCGCCGGCCTGATCGGCGCCGGCCGCACCGAGGTGATGCGCGCCATTTCCGGCGCCGACCCGCGCCGCGCCGGCGAGATCCTCGTCGACGGCAAGCCGGTGGCGATGAGAAGCCCGGCCGACAGCATCGAGGCCGGCATGGTGCTGGTGCCGGAGGACCGCAAGGCGCAGGGCGCCATCCTCGACCATTCCATCGCCGAGAATCTCTGCCTGCCCAACCTCGACACGGTCGCGCCTGACGGCTGGGTGCGGCCGGCCCGGGTGCTCGCCTTCGCCCGCGAGGGCATCCGCAAGCTCGGCGTCAAGGGCGTGCCGGACCAGGCGATCCGCAACCTTTCCGGCGGCAACCAGCAGAAGGCGATCATCGCCAAGTGGATCGCCCGCAGCCCGAAAGTGTTCATCCTGGACGAGCCGACCCGCGGCATCGACGTCGGCGCCCGCGCGGCGATCTACGACGTCATCGCCGACCTCGCCCGGGCCGGCATGGCGGTCATCGTGGTGAGCTCGGATCTGGAGGAAGTGCTGGGCCTGTCCCACCGCGTCGTGGTGATGAGCCGCGGGCGGCAGATGGGCATCCTGCCGAAGGAGAAGGCGACCAGCGTCGCCGTGATGGAGCTGGCCACGGCGTGA
PROTEIN sequence
Length: 503
MSVPPAATGNAPTGLSIRGIKKSFGDVDVLFGIDLDVRPGEVVALLGENGAGKSTLSGIIAGAVRPSAGTMTWNGAPYAPHQPGDAIAAGIGMIHQEMRLLPHLSIAENVFVGRLPLKGGRIDRDTMNRLASAQLRRLGLDVPPTRLVGTLTIAAQQQVEIAKALVLQAKLLILDEPTAALGGHETDLLFEQINRLKAEGYSFIYISHRLEEIARIADRVVVLRDGHLVATHDTAQLPVRTFVEAMVGRSVERMFPDLPAPGGDVVLEVRGLTSAHGAFRDVGFEVRKGEILGFAGLIGAGRTEVMRAISGADPRRAGEILVDGKPVAMRSPADSIEAGMVLVPEDRKAQGAILDHSIAENLCLPNLDTVAPDGWVRPARVLAFAREGIRKLGVKGVPDQAIRNLSGGNQQKAIIAKWIARSPKVFILDEPTRGIDVGARAAIYDVIADLARAGMAVIVVSSDLEEVLGLSHRVVVMSRGRQMGILPKEKATSVAVMELATA*