ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_16012_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13751..14533

Top 3 Functional Annotations

Value Algorithm Source
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:CCV08968.1}; EC=1.1.1.125 {ECO:0000313|EMBL:CCV08968.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 258.0
  • Bit_score: 411
  • Evalue 8.70e-112
putative short-chain dehydrogenase/reductase (EC:1.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 260.0
  • Bit_score: 403
  • Evalue 2.80e-110
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EY82_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 258.0
  • Bit_score: 411
  • Evalue 6.20e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium metallidurans → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGACCCGCTTCGCCGGAAAGACCGCCGTCGTCACAGGCGCCAGCCGCGGCATTGGCCTCGCCATCGCCGAGCGCTTCGCCTCCGAGGGCGCCAGCGTGCTGCTCAGCGCCAACGAGGAGCGCGTGCACGAAGCGGTCGAAGGCCTGAAGGCCAAGGGCTGGGCGGCGGCCGGCTTCGTCGGTGACGTCACCGATGCCGCCTCGGTCAAGGCGCTCTACGATGCGGCGGAGCAGCAGTTCGGCCGCGTCGACATCTCGGTGCAGAACGCCGGCGTCATCACCATCGCCCGCATCGAGGCGATGACCGAGGCCGAGTGGGACAAGGTGATGGACGTCAACACCAAGGGCGTCTTCCTGTGCTGCCAGGAGGCCATCCGCCGCATCCGCAAGCACGGCGGCGGCGGCCGGCTGATCAACACCGCCTCCGGCCAGGCCCGGCAAGGCTTCATCTTCACCCCGCACTACGCCGCCTCGAAGTTCGGCGTCGTCGGCATCACCCAGAGCCTCGCCAAGGAAGTGGCCAAGGAAGGCATCACCGTCAACGCCTTCTGCCCCGGCATCATCGGCACCGAGATGTGGGCCTATAACGACAGCGCCTGGGGCAAGCTGCTCGGCGACTACAAGCCCGGCGAGCTGATGGCCGAATGGGTGCGCGGCATCCCGATGGGCCGCGCCGGCACCGGCGCCGAGGTCGCCGCGCTGGTGGCTTTCCTGGCGAGCGCCGATGCAGCGTACATCACGGGGCAGACGGTGAATGTGGATGGCGGGCTGATCATGTCGTGA
PROTEIN sequence
Length: 261
MTRFAGKTAVVTGASRGIGLAIAERFASEGASVLLSANEERVHEAVEGLKAKGWAAAGFVGDVTDAASVKALYDAAEQQFGRVDISVQNAGVITIARIEAMTEAEWDKVMDVNTKGVFLCCQEAIRRIRKHGGGGRLINTASGQARQGFIFTPHYAASKFGVVGITQSLAKEVAKEGITVNAFCPGIIGTEMWAYNDSAWGKLLGDYKPGELMAEWVRGIPMGRAGTGAEVAALVAFLASADAAYITGQTVNVDGGLIMS*