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berkeley_reactor_200306_biofilm_scaffold_16012_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17127..17939)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036576B6 similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 270.0
  • Bit_score: 377
  • Evalue 7.90e-102
putative Xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 268.0
  • Bit_score: 315
  • Evalue 1.40e-83
Putative Xylose isomerase {ECO:0000313|EMBL:CCO57668.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 268.0
  • Bit_score: 315
  • Evalue 6.70e-83

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Taxonomy

Vibrio nigripulchritudo → Vibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGAAGTTGTCGCTGACATCCTGGTCGCTGCGGGCCTGCAGCCTGGAGGAGGCCGCCGGGATCGCCCATGTGCTCGGCATCGGCGCCCTCGACCTCGGCTATTTCTACGGGCCGGCCCTCGACAAGGCGGCGCTGCTGGCCGACCCCGACAAGGCGGCCGAGCGGGTGCGGCGGCTCGGCGTCACCGTGCCGAGCTTCTACCACCTCTTCGGCGACAGCCTGGCGGCCCGCAACCTCGCCGATGCCGGGCATCTCGACGCCAATGTCGCGGATTTCCGCCAGGTCGCGCGCTTCTGCCGCGCGGCCGGCATCCCGACGGTGTTCGTGCTGCCGGGCGTGGTCAATCCGGGGCAGGGCCGGGCGCAGGCGCTGGCGCAGTCCGCGGCGAGCCTCAACCGGCTGCTGCCGATCGCGGCCGAGGCCGGGGTGACGCTCACGGTCGAGCCGCATGTGCATTCCTATCTCGAAAGCCCGGCGCTGGCGCTCGAATTGATCGAGCGCGTGCCCGGGCTGAAGCTGACGCTCGACTATGCCCATTTCGTCTGCCTCGGCTGGCGGCAGGACGAGATCGACGTTCTGGCGCCCCATGCCGCGCACATGCATGTGCGCCAGGGCAAGCCGGGCGCGCTGCAGACCAAGGGCCATGAGGGCACGATCAACATGGCGGCGCAGCTCGCCACGTTGAAGGCGGCAAACTATGCCGGCTATCTATCCCTGGAATATGTGCATCAGGATTATATGGGAACGCTCTACGACGACGTGCTGACCGAGACGATTCAGCTGCGCGACCAGATCAGGGCCTGGCTGGCATGA
PROTEIN sequence
Length: 271
MKLSLTSWSLRACSLEEAAGIAHVLGIGALDLGYFYGPALDKAALLADPDKAAERVRRLGVTVPSFYHLFGDSLAARNLADAGHLDANVADFRQVARFCRAAGIPTVFVLPGVVNPGQGRAQALAQSAASLNRLLPIAAEAGVTLTVEPHVHSYLESPALALELIERVPGLKLTLDYAHFVCLGWRQDEIDVLAPHAAHMHVRQGKPGALQTKGHEGTINMAAQLATLKAANYAGYLSLEYVHQDYMGTLYDDVLTETIQLRDQIRAWLA*