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berkeley_reactor_200306_biofilm_scaffold_16012_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(19954..21159)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6BAA1_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 393.0
  • Bit_score: 265
  • Evalue 8.50e-68
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 393.0
  • Bit_score: 265
  • Evalue 2.40e-68
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACS60842.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 393.0
  • Bit_score: 265
  • Evalue 1.20e-67

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGGCATCACGCGCCGGGCAGTCCTGGCATCGGCGGCCGCCGTCGCCGCGAGCGCGGCGCTGGGCGGCCTCGCCCGGGCCGAACCGTTTCACGGCTTCGATCCCGACAAGGTCGGCCCCGCCAACCCGGACAAGGCGGCGCTCGCCGCCATGGTCAAGGACGCCATGGCGAAGACGCCGCCGCGCAACGGCAAGGCCTATGTGTTCGGCTACACCATGTGGGGCGGCTCCTCGCCCTTCTCCCAGCTCAACCGTCAGGGCCTGCAGGAGATCGCGGAGGCCGCCGGCATCGAGCTCCTGACCGCCGACAACGAGTGGGATCCGCAGAAGAACGTCGCCAACGCCCAGTCCTTCGCGACGCGCAACGTCGATTTCGTCATCAACAGCCTGCTCGACGTGCAGTTCGGCGGCGCGGTGAAGAAGCCGCTCGACGATGCCGGCATCCCGATCATCTCGCTCGACATCCCGATCATCGGCGCCGCCTGGGTCGGCGTCGACAATGCCCGTGCCGGCTTCCGGGCCGGCACCTATGTGGCCGAGGCCGCGGTGCAGCGCTGGGGCAAGGACAAGGCCGGCGAGGCGACGCTGGTGATCGCCGCCTTCCCGCTCGTCGGGCCGAATGGCCGGCTGCGCAACCTGTCGCAGGAGGCGGGGGTCAAGTCGGTGATGCCGGACCTGCCGGCGAGCCAGATCGTCTGGCTCGACATGCAGGGCACCGCCGACAGCGGCTTCACGGCGATGAACAACCTCATGGGGCGTCTCGATCCGGACAAGCCCGTGCTGGTCGCCTCCTTCAGCGACGAGCAGCTCGCCGGGGCGCTGCGCGCGCTCGCTGCGGCCGGTCGGAGCGAGAGCACGCTGGCCGTCGGCATGGGCGGGGAGCGGCTCGACCTGCTCGGGCAGGACCCGGCCTTCGTCGGCACCATGTCCTTCTTCCCCAAGGGCTATGCCAATGCCGCGGTGCCGACGGCGCTCGCCATGCTGGCCGGCAGGCCGGTGCCGAAGAGCGTGTTCGCCTTCAGCGACCTGGTGAAGCCGGACACTGCCTGCAAGGTCGATCCGGCGGTCGCCTGCCGCGCCCGTCCGGACTGGCAGCCGGCCGACGCCGCCATCGACGAGGCGGCCTACCGCGCCTATGTCGCGGCGCTGCATCAGCGCGACGAGTTCAGGAATTTCCAGGTGCTGCTGCCGCCGATCCCCGGCTGA
PROTEIN sequence
Length: 402
MGITRRAVLASAAAVAASAALGGLARAEPFHGFDPDKVGPANPDKAALAAMVKDAMAKTPPRNGKAYVFGYTMWGGSSPFSQLNRQGLQEIAEAAGIELLTADNEWDPQKNVANAQSFATRNVDFVINSLLDVQFGGAVKKPLDDAGIPIISLDIPIIGAAWVGVDNARAGFRAGTYVAEAAVQRWGKDKAGEATLVIAAFPLVGPNGRLRNLSQEAGVKSVMPDLPASQIVWLDMQGTADSGFTAMNNLMGRLDPDKPVLVASFSDEQLAGALRALAAAGRSESTLAVGMGGERLDLLGQDPAFVGTMSFFPKGYANAAVPTALAMLAGRPVPKSVFAFSDLVKPDTACKVDPAVACRARPDWQPADAAIDEAAYRAYVAALHQRDEFRNFQVLLPPIPG*