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berkeley_reactor_200306_biofilm_scaffold_16012_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 26821..27798

Top 3 Functional Annotations

Value Algorithm Source
Transketolase central region n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3IZT7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 324.0
  • Bit_score: 487
  • Evalue 8.50e-135
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta {ECO:0000313|EMBL:KDB02346.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 323.0
  • Bit_score: 501
  • Evalue 4.70e-139
transketolase central region similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 324.0
  • Bit_score: 481
  • Evalue 1.00e-133

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Taxonomy

Defluviimonas sp. 20V17 → Defluviimonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGTCGAGATCACCTATCGCGACGCGCTGCGCCAGGCCCTGCACGACGCCATGCTGGCGGACGGCTCCGTCGTCGTCATCGGCGAAGAGGTCGGCGTCTATGGCGGCGCCTATGGCGTCACCAAGGACCTGATCCGCGAGTTCGGGCCGGAGCGGCTGATCGACACGCCGATCAGCGAGCCGGCGATCATCGGCGTCGCCGTCGGCGCGGCCATGACCGGCCTGAGGCCGGTGGCCGAGCTGATGTATGTCGACTTCCTCGGCCTCACCATGGACCAGGTCGGCAACCAGGCCGCCAAGATCCGCTACATGTTCGGCGGCCAGATCGGCGTGCCGATGGTGCTGCGCACCCAGGGCGGCACCGGCCGCTCCGCCGGCGCCCAGCATTCCCAGAGCCTCGAGGCCTGGATCATGCACACGCCGGGCCTGCGCCTGGCCATGCCGGCCACCGCCGCCGACGCCTACCACCTCCTGCGCCACAGCCTGACCCTGCCCGACCCCGTGGTGTTCATCGAGCACAAGTCGCTCTATGCCCGGAAGGAGGAGGCGGACCTCTCCACGCCCGAGGCACCATGGGGCAAGGCCGTCATCCGCCGGCGCGGCGAACATGTGACGCTCGTCACCTATTCGCGCATGGTGCATGTCGCGCTGGAGGCGGCGGAGCGGCTGGCGGCAAGCGGCATCGGCGTCGAGGTCATCGACCTGCGCACGCTGAACCCGCTCGACATGGACACGGTCATCGCCTCGGTGAACCGCACCGGCCGGGCCGTGGCGCTGAGCGAGGGCGCCCGGACGGCCGGCGTCGCGGCCGAGATCGCCGCCCGCATCACCGAGGAATGCTTCGACTATCTCGAAGACCCGGTGATCCGCATCGCCGGCGAGGACATCCCGATCTCGGTTTCGCCCGACCTCGAAGGCGCCAGCATCCCGACCGTCGGCCTCGTGGTCGAGACCATCGCCCGGATGGTGTCGCGATGA
PROTEIN sequence
Length: 326
MVEITYRDALRQALHDAMLADGSVVVIGEEVGVYGGAYGVTKDLIREFGPERLIDTPISEPAIIGVAVGAAMTGLRPVAELMYVDFLGLTMDQVGNQAAKIRYMFGGQIGVPMVLRTQGGTGRSAGAQHSQSLEAWIMHTPGLRLAMPATAADAYHLLRHSLTLPDPVVFIEHKSLYARKEEADLSTPEAPWGKAVIRRRGEHVTLVTYSRMVHVALEAAERLAASGIGVEVIDLRTLNPLDMDTVIASVNRTGRAVALSEGARTAGVAAEIAARITEECFDYLEDPVIRIAGEDIPISVSPDLEGASIPTVGLVVETIARMVSR*