ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_16012_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 30287..31804

Top 3 Functional Annotations

Value Algorithm Source
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 515.0
  • Bit_score: 352
  • Evalue 7.10e-94
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZN6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 515.0
  • Bit_score: 352
  • Evalue 5.10e-94
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 511.0
  • Bit_score: 350
  • Evalue 7.10e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGACCGCATCGCGGCCCCGGCCGGACCGCGCCTCAGCGCGCGGGGCATCGGCAAGAGCTTCCACGGCAACCCGGCGCTGGCCGATGTCGACCTCGACCTGCGCGGCGGCGAAATGCTGGCGCTCGTCGGCGCCAACGGCGCCGGCAAGTCGACCCTGGTCAAGATCGTCTGCGGCGCGCTCGGCGCCGACCATGGCGAGATCCGCGTCGACGGCCGGCCCGTCTCGTTCCGCTCGGTGCGCGACGCCCTGGCGGCCGGCATCGCCGTCGCCCATCAGCAGGTCGCGATCATCCCCTCGCTCACCGCCGCCGAGAACATCATGCTCGGGCGCGAGCCGCTGCGCGGCGGCCTGATCCGCAACGGCCCGCTCTATGCCGAGGCCGGCCGGATCGCCCGGCGCTTCGGCATCGACATCGCCCTCGACCGGGAATGCGGCGAGCTCGGGCTCGGCGAGAACAAGATCCTCGACATCCTCAAGGCGATGGAAAGCGGGCCCGCCATCCTGATCCTCGACGAGCCCACCGCCTCGCTGACGCTGAACGAGAGCCGCAAGCTGTTCGCCTTCCTCAGCGACCTCAAGGCGCAGGGCCTCGCCATCCTGTTCATCTCCCATCACCTCAACGAGATCTTCGAGCACTGCGACCATGTCGTCGTGCTCAAGGACGGTCGCAAGGTGCATGACGGCCCCGTCGCCGCGACCACGCCGGCGGCGGTGGTGCAGATGATGGTCGGCCGCGCCATCGAGGACACCGACTGGTCGAGCTCGGCCGGGCGCGAGGCCGTGACGCTGCGCCTCAGGGACGTCACCATCGCCGGCCTCAAAGTGCCCGAGCTCACCGTCCATGCCGGCGAGATCGTCGGCCTTGCCGGCGTGCTCGGCGGCGGCCAGACGCAGGTCCTCGAGACGCTGGCGGGCGATGCCGGGGCCCTGGCGGGCCGGGACATCCTGGTCAACGGCAAGCCCGGCTGTCCCGCCAGCGTCTCCGAGGCGATCGACCGCGGCGTCTATCTCGTGGCCGACGAGCGGCTGCGGAAGGCGCTGTTTCCCGGGCTCTCGGTCGAGGAGAACCTGCTCACCGCCTCGCTGGCGGCGAACAGCCGCTTCGGCTTCATGCAGGGCGGAGCGGTGGCCGCGGCGGCGCGGCAGGCGATCGGACGGCTCGCCATCAAATGCGCCGGCCCCGGCCAGGACATCCTGCAGCTCTCCGGCGGCAACCAGCAGAAGGTGGCGTTCGGCCGCTGGCTGATCCGCATGGCGGGCGCCGGCGGCGGGACGAAGCCGCTCCTGCTGCTCGACAACCCGACCGAGGGCGTCGACGTCGGCAGCAAGGCCGAGCTCTACGCCCTGATCCGCGACCTCGCGCGGGCCGGCGCCAGCGTGCTGATCGCCAGCGCCGAGTTCCCCGAAATGCTCAAGCTCTGCGACCGCATCTACTGCATCGCCCATGGCAGCCTCGGCCGCTGCCTGGAGCGGACCGAATTCTCCGAAGAACGACTGCTGCTCGAGGTGAACTGA
PROTEIN sequence
Length: 506
MDRIAAPAGPRLSARGIGKSFHGNPALADVDLDLRGGEMLALVGANGAGKSTLVKIVCGALGADHGEIRVDGRPVSFRSVRDALAAGIAVAHQQVAIIPSLTAAENIMLGREPLRGGLIRNGPLYAEAGRIARRFGIDIALDRECGELGLGENKILDILKAMESGPAILILDEPTASLTLNESRKLFAFLSDLKAQGLAILFISHHLNEIFEHCDHVVVLKDGRKVHDGPVAATTPAAVVQMMVGRAIEDTDWSSSAGREAVTLRLRDVTIAGLKVPELTVHAGEIVGLAGVLGGGQTQVLETLAGDAGALAGRDILVNGKPGCPASVSEAIDRGVYLVADERLRKALFPGLSVEENLLTASLAANSRFGFMQGGAVAAAARQAIGRLAIKCAGPGQDILQLSGGNQQKVAFGRWLIRMAGAGGGTKPLLLLDNPTEGVDVGSKAELYALIRDLARAGASVLIASAEFPEMLKLCDRIYCIAHGSLGRCLERTEFSEERLLLEVN*