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berkeley_reactor_200306_biofilm_scaffold_16012_40

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(42041..42916)

Top 3 Functional Annotations

Value Algorithm Source
L-arabinose transport system permease protein AraQ n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PPX1_THESS similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 272.0
  • Bit_score: 235
  • Evalue 4.00e-59
araQ; L-arabinose transport system permease AraQ similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 272.0
  • Bit_score: 235
  • Evalue 1.10e-59
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:ADW21708.1}; TaxID=743525 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus scotoductus (strain ATCC 700910 / SA-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 272.0
  • Bit_score: 235
  • Evalue 5.60e-59

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Taxonomy

Thermus scotoductus → Thermus → Thermales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 876
ATGGCCGCCCTGCCGCACGGCGCCCGGCGCTGGCTCGAAGAGCGCCGCATGACCGGGCTCGACCTGCCGATCTGGCTCATCGGCATGGCGGTCGCGCTCGCCTGGGCCGCGCCCTTCGTCTGGATGGTCTCGACCTCGCTGAAATACCCGTCCGACGTGATGACGCAGGACATCGAATGGTTCCCGCGCCGCATCACCTTCGACAATTACGCCAGGGTTTTCGACTATCCCGTGCTGCGCTGGGGCCTCAACAGCCTGATCCAGGCGGCGACCTCCACCGCGCTCTCGGTGCTGTTCGGGGCGATGGCGGGCTATGCCCTGGCGCGGCTGCGCTTTCCCGGCCGGGACGCCCTGTTCGCCCTGTTCCTCGCCTCGCTGATGATCCCGACCGAGGTCTCGATCATCCCGATGCTGCTCGGCTTCATCAAGATCGGCTGGGCCTCCAGCTACCAGGCGCTGATCCTGCCGACGATCGGCAACGTCTTCAGCGTCTACATCTTCCGGCAGTTCTTCCTGGCCTTCCCGACCGAGATCGAGGAGGCGGCGCGCGTCGACGGCGCCGGGCCGTTCCGCCTGTTCTTCCTCATCGCCCTGCCGCTGGCGCGGGCCCCGGCGATCGCCGCGGCGGTGATCCTGTTCACGCTGAACTGGAACAACTTCCTGTGGCCGCTGCTCGTCACCTTCGACGAGTCGATGAAGACCCTGCCGGTCGGCATCGCCGCCTTCACCCCGGTGGTCGGCACCCACACGCAGCTCGAGGGCTTCTCCGTCGCCATGGCCGCGGTGACCATCCTCAGCGTGCCGAGCCTGCTGCTGTTCTTCTTGCTGCAGCGCTACTTCATCCAAGGCATCTCCCAGGGAAGCATCAAGCAGTGA
PROTEIN sequence
Length: 292
MAALPHGARRWLEERRMTGLDLPIWLIGMAVALAWAAPFVWMVSTSLKYPSDVMTQDIEWFPRRITFDNYARVFDYPVLRWGLNSLIQAATSTALSVLFGAMAGYALARLRFPGRDALFALFLASLMIPTEVSIIPMLLGFIKIGWASSYQALILPTIGNVFSVYIFRQFFLAFPTEIEEAARVDGAGPFRLFFLIALPLARAPAIAAAVILFTLNWNNFLWPLLVTFDESMKTLPVGIAAFTPVVGTHTQLEGFSVAMAAVTILSVPSLLLFFLLQRYFIQGISQGSIKQ*