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berkeley_reactor_200306_biofilm_scaffold_16012_43

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(45501..46643)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037BDFF6 similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 342.0
  • Bit_score: 560
  • Evalue 1.20e-156
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 337.0
  • Bit_score: 227
  • Evalue 5.30e-57
Putative transcriptional regulator {ECO:0000313|EMBL:AGI26893.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 337.0
  • Bit_score: 227
  • Evalue 2.60e-56

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Taxonomy

Pseudomonas denitrificans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGGACGCGCGGGGCGAGGCCGGCGCCGGGACGGGCGAGATCGCCGTCCCGGCCTTCAACCTGATCATGCAGCCGGAATTCCCGCTGAACGCGCTGGTGCTGGCGAGCGAGGCGCTGCGCATCGCCAACCAGAACAGCGGCCGCGAGCTGTTCCGCTGGCGCTTCGTCTCCGAGGACGGGGCGCCGGTGCGCGCCAGCAACGGCCTGTGGATGTCGGCCGACGACAGCCTGCAGACCATGCCGCCGGCCGATTTCTACCTCGTCTTCGAGGGCAACCTGCCGGTGCAGCGCAACTCGCCGAAGCTGCTCAACCAGCTTCGCACCGTCGCCCGCTTCGGCGCGGCCATCGGCGCGGTCGACACCGGCACCTTCGCCCTGGCCCAGGCCGGCCTCGTCGACAGCCGTGCCGTGGTGCTGCACTGGGAAGCGGTGCCGACCTTCCGCGAGCGCTTTCCGCAGATCGACGTGCAGGGGCAGATCTACCGGATCGACGGCCAGCGCATCACCTGCGCCGGCGGCATCGCCACGCTCGACATGATGCTCGACCTGATCGCGCGGCTGAAGTCGCGGACGCTGGCCAACGAGGTCGCCAACGCCCTGGTCTATGCCCCGCGTCCGGCCGAGGCGCAGCAGCGCCTGGACGACCGGCCGAAGCCGGCCCGGCGCACCCTGGCGGACCGGATCGTCGCCCTGATGGAGCGCAACCTCGACTTCCCGCTGCCGCTGGAGGACATTGCCGGGCAGCTGGAAGTCTCCCCCAAGACGATCCTGCGCGAATGCCGCCGCAGCTTCGAGGAGACGCCGATGCGCCTCTACCTGCGCATCCGGCTGCAGGCCTCGCGCAACATGCTGTTCTACGAGGAGTTCGGCATCAAGGACGTCGCCACCGCCTGCGGCTTCTCCTACCCCTCCGTGTTCTCGCGCGCCTTCCATGCCCAGTTCGGCATGACCCCGCGCGATTTCCGCGCCTCGCTGCGCCGCCAGCAGAACCAGGCCTATCGCCCCGAGGTGCGGCGGCTGTCGATCACCCCGCCGGCACCCGGCGCGGGGGCGGACGGCGCGTCGACGACCCCCGGCCTGTCCATCGATGCAAACAGCAAGTCCATTTTGATCAAGTCCGACCGCGAAACTGGTTCACTATAG
PROTEIN sequence
Length: 381
MDARGEAGAGTGEIAVPAFNLIMQPEFPLNALVLASEALRIANQNSGRELFRWRFVSEDGAPVRASNGLWMSADDSLQTMPPADFYLVFEGNLPVQRNSPKLLNQLRTVARFGAAIGAVDTGTFALAQAGLVDSRAVVLHWEAVPTFRERFPQIDVQGQIYRIDGQRITCAGGIATLDMMLDLIARLKSRTLANEVANALVYAPRPAEAQQRLDDRPKPARRTLADRIVALMERNLDFPLPLEDIAGQLEVSPKTILRECRRSFEETPMRLYLRIRLQASRNMLFYEEFGIKDVATACGFSYPSVFSRAFHAQFGMTPRDFRASLRRQQNQAYRPEVRRLSITPPAPGAGADGASTTPGLSIDANSKSILIKSDRETGSL*