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berkeley_reactor_200306_biofilm_scaffold_22810_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19285..19896

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Cro/CI family id=3638049 bin=GWF2_Methylomirabilis_70_14 species=Herbaspirillum frisingense genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 180.0
  • Bit_score: 119
  • Evalue 2.20e-24
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 190.0
  • Bit_score: 113
  • Evalue 5.90e-23
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 180.0
  • Bit_score: 120
  • Evalue 1.80e-24

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCGGCGCGGCAACAGGGGCGGGCGGGAGGCTGGCGTGGCGGCGGTTGGCGAGCTCGGACTGGTCCTGCGCCGGCTGCGCAAGGCGTCGAACCTGACGCTGGAGACGGCCGCGAGGACGGCAGACGTCACCAAGGGGTACCTTTCCAAGGTGGAGTCGGGCAGCGCCATGCCCTCCATCGCCGTGGTCAGCCGCCTCGCCGACGTCTATGGCGTGCAGTTCTCCGACATCTTCATCCCGCAGGGCGAGCGGGGCCCGATCTCCGTGGTCCGGGCCAGCGATCGGGTGCCGATCAACCGCAACGGCAGCGAGCTCGGCTATGTCTACGAGGTGGCCTCGCTCAACAAGGCCGATCCCCGCGCGGAAATCTTCTTCCTGACCTTGCCGTGCATCGAGGGCGAGGGCCTGCCGCGATACCGGCATTCCGGCGAGGAGATCCTCCTGATGCTGGAGGGGCAGATCCGCTTCAACTTCGTCGGCACGGACATCGTCCTCGGGCCGGGCGACTGCATCCAGTTCGAGGCGAGCTTCGAGCATTACGGCGTCGCCATCGGCGGTAAGGAGGCCAAGGCCTTCGTCGTCATCATCTCGGAGCGGCTGCGCGGGTCGTAA
PROTEIN sequence
Length: 204
MRRGNRGGREAGVAAVGELGLVLRRLRKASNLTLETAARTADVTKGYLSKVESGSAMPSIAVVSRLADVYGVQFSDIFIPQGERGPISVVRASDRVPINRNGSELGYVYEVASLNKADPRAEIFFLTLPCIEGEGLPRYRHSGEEILLMLEGQIRFNFVGTDIVLGPGDCIQFEASFEHYGVAIGGKEAKAFVVIISERLRGS*