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berkeley_reactor_200306_biofilm_scaffold_22810_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 31045..31773

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036FDF7C similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 237.0
  • Bit_score: 264
  • Evalue 8.70e-68
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 223.0
  • Bit_score: 211
  • Evalue 2.50e-52
GntR family transcriptional regulator {ECO:0000313|EMBL:GAN46535.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 224.0
  • Bit_score: 211
  • Evalue 9.40e-52

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Taxonomy

Methylobacterium sp. ME121 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGATGCCGAACCTCGACTTCTTCGACGCCGCCAGGCTCGACATGCGTCTTCCCAAGACCACGCAGCTCTACGAGCTGGTGCGGGGGGCGATCATCGCCATGGTGCTGCCGCCGGGCGAGGCGATCCTCGAGCGCGAGATCTGCGCCCGGCTCGGCGTGTCGCGGACGCCGCTGCGCGAGGCGGTCCTGCAACTGGCGACCGAGCGGCTCGTGGTGGTCAGGCCGGGCGGCGGCACCTTCGTCAACGCCATCGATCTCGGCGAGGTCCTTGCCGGCCAGCTGGTGCGCGACACGCTCGAGGTCCGGCTGACCCGGCTGGCGGCGCGCCGGTTCGCGCCGGAGCAGGCCAAGGATTTCGAGCTCTCGCTCTACCGGCAGAAGGAGGCGGCCCGGCGCCGCGACGTCTCGGAGTTCTTCGAGCTCGACAACGGCTTCCACCGGCTCGTCTGCACCGTGTCGGGCATATCCGGCAGCTGGCGCACGCTGCACGCCGCAACCGGGCAGCTCGACCGGGTGCGCCGCCTGGCTTTTCCGATCGAGGACAATTACGAGACCGTGCTCGCCGAGCATGCGGCGATCTACGAGGGGGTGCGACGGCACGACGAGGCTGCGGCGGTCGCCGCCCTGCAGGAGCAGCTCGACAGCATCTTCGTCACCATCCGCCTCATCCGCGAGCAGCGTCCGGAGCTTCTGAGCGGCGGCGAGGTCGGCCTGGCCGATATCCGCTGA
PROTEIN sequence
Length: 243
MMPNLDFFDAARLDMRLPKTTQLYELVRGAIIAMVLPPGEAILEREICARLGVSRTPLREAVLQLATERLVVVRPGGGTFVNAIDLGEVLAGQLVRDTLEVRLTRLAARRFAPEQAKDFELSLYRQKEAARRRDVSEFFELDNGFHRLVCTVSGISGSWRTLHAATGQLDRVRRLAFPIEDNYETVLAEHAAIYEGVRRHDEAAAVAALQEQLDSIFVTIRLIREQRPELLSGGEVGLADIR*