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berkeley_reactor_200306_biofilm_scaffold_23687_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2687..3928)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037D6F7B similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 403.0
  • Bit_score: 367
  • Evalue 1.60e-98
Lytic transglycosylase {ECO:0000313|EMBL:KKB76911.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 388.0
  • Bit_score: 378
  • Evalue 9.90e-102
lytic murein transglycosylase similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 395.0
  • Bit_score: 359
  • Evalue 1.30e-96

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGTCCAGCCGAGCCCGCACGATCGCACAGCGCACCGGCGCCGGGCTGGGACTCGCGGGGCGCGGCCTCCTCGTCGCCGCCGCCGTGCTGCTCCTCGCCGCCGCGCCGGCGCGGGCGGCGGATTTTGCCGCCTTCGTCGCCGGGTTGTGGCCGCAGGCCGAGAAGGCCGGCGTCAGCCGCGCCACCTTCGACGCGGCCTTCGCCGGGGTGACGCCGGACCCGAAGGTGATCAGCCTCGCCGGGGCGCAGCCGGAGTTCAGCCAGACCATCCGCAGCTATGTCCAGAGCCGCGTCACCGACGCCCGGGTGGCGCAGGGGCGCGACCTCGCCCGGCGCTGGAAGCCCTGGCTCGACCGGATCGAGCGGGAGACGGGCGTCGACCGGGCGGTGATCCTGGCGATCTGGGGGCTGGAGAGCAATTACGGCAGCGGCGCCGGCAATTCGGACACCATCCGCTCGCTCGCCACCCTCGCCTGCTGCACGACGCGGCGCCCGGACTATTTCCGCGGCGAGCTGATCGCGGCCCTGCAGATCCTCGAGGCGCACGACATCCCGCCGCGCGCCATGACCGGCTCCTGGGCCGGCGCGCTCGGCCAGACCCAGTTCATGCCGTCGAGCTTCCTCAAGCACGCCGTCGACATGGACGGCGACGGCCGGCGCGACATCTGGCGCAGCGTGCCCGACGTGCTCGGCTCGATCGCCACCTATCTCGACCACTACGACTGGAAGACGAAGCAGCGCTGGGGCTACGAGGTGCGGCTGCCGGCGGACTTCGACTTCACCGCGATCACGCCCCACGAGGGCCAGCCACCGGCGGCCTGGGCGAAGCTCGGCCTGACGCGGGCCGACGGCCAGGCGCTGCCGGCCGACGGCAAGGCCTGGCTGCTGCTGCCGGCCGGCGCCCGCGGCCCGGCCTTCCTGACCCTGGAGAACTACTGGGCGATCAAGAGCTACAACATCTCCGACAGCTACACCCTGTCGGTCGGACTGCTGGCCGACCGCATCCGCGGCGGCGGGCCGGTCGCCGGCACCTGGCCGGCGGACGACAAGGCGCTGACGCGCGTCCAGCTCGAGGCGATGCAGCGCCGGCTGGTGGCGCTCGGCTTTTCCGTCGACACCATCGACGGCAAGGTCGGGCCCGGGACGCGGGCGGCGGTGCGCGCCTGGCAGGCCTCGGTCGGCCTCACCGCCGACGGCTATGCCACATCGGCGCTGCTGCAGCGCATGGGCGCGGTGCCGTGA
PROTEIN sequence
Length: 414
MSSRARTIAQRTGAGLGLAGRGLLVAAAVLLLAAAPARAADFAAFVAGLWPQAEKAGVSRATFDAAFAGVTPDPKVISLAGAQPEFSQTIRSYVQSRVTDARVAQGRDLARRWKPWLDRIERETGVDRAVILAIWGLESNYGSGAGNSDTIRSLATLACCTTRRPDYFRGELIAALQILEAHDIPPRAMTGSWAGALGQTQFMPSSFLKHAVDMDGDGRRDIWRSVPDVLGSIATYLDHYDWKTKQRWGYEVRLPADFDFTAITPHEGQPPAAWAKLGLTRADGQALPADGKAWLLLPAGARGPAFLTLENYWAIKSYNISDSYTLSVGLLADRIRGGGPVAGTWPADDKALTRVQLEAMQRRLVALGFSVDTIDGKVGPGTRAAVRAWQASVGLTADGYATSALLQRMGAVP*