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berkeley_reactor_200306_biofilm_scaffold_23687_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9547..10044

Top 3 Functional Annotations

Value Algorithm Source
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 163.0
  • Bit_score: 231
  • Evalue 7.80e-58
RNA pyrophosphohydrolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTC4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 163.0
  • Bit_score: 231
  • Evalue 5.60e-58
NUDIX hydrolase similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 164.0
  • Bit_score: 213
  • Evalue 4.50e-53

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGACCGACCGCAGCGCCCTGCCTTACCGCCCCTGCGTCGGCATCATGCTGCTGGACCGCGACGGCCGCGTCTTCATCGGCCGCCGCGGCGGCGGTGGCGCCGAGCCGGCCTTCGAATGGCAGATGCCGCAGGGCGGCATCGACGAGGGCGAGGAGCCGCGCGCGGCGGCGCTGCGCGAGCTTTGGGAGGAGACCAGCGTGCGCAGCGTCTCCCCGCTCGCCGAGGCGCCGGACTGGTACAGCTACGACCTGCCGCCGGAGGCGGTCGGCCGCGGCTGGACCCTCAGATATCGCGGCCAGACCCAGAAATGGTTCGCCTTCCGTTTCGAGGGCACCGGGGCCGAGATCGACATCGCCAGCCCGGCCGGCGGCACCGTCCGGCCGGAATTCGACGCCTGGCGCTGGGAGGCGATGGACCGGCTCCCCGGCCTGGTCGTGCCGTTCAAGCGGCCGGTCTACGAGAAGGTCGTCGCCGCCTTCCGGCATCTCGCGCCGTGA
PROTEIN sequence
Length: 166
VTDRSALPYRPCVGIMLLDRDGRVFIGRRGGGGAEPAFEWQMPQGGIDEGEEPRAAALRELWEETSVRSVSPLAEAPDWYSYDLPPEAVGRGWTLRYRGQTQKWFAFRFEGTGAEIDIASPAGGTVRPEFDAWRWEAMDRLPGLVVPFKRPVYEKVVAAFRHLAP*