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berkeley_reactor_200306_biofilm_scaffold_20018_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1827..3683

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003652AF1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 592.0
  • Bit_score: 616
  • Evalue 1.80e-173
Diguanylate cyclase {ECO:0000313|EMBL:KHL25883.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 608.0
  • Bit_score: 648
  • Evalue 7.70e-183
GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 605.0
  • Bit_score: 611
  • Evalue 1.60e-172

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Taxonomy

Kirrobacter mercurialis → Kirrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
ATGTTGCAGTTGCAGAACCTGATCCTCGAGATGATCGCGAAGGGCGAGCCGCTGCAGGCCACCACCGATCGTCTCTGCCTGGAGATCGAGCAGCGGCTGCCGGGCGTGGTCAGCTCGATCCTCGCCATCGACCGCGAAGGCTTCATCCATCCCCTCTCCGGCCCGAGCCTGCCCAGGGGTTTCTCCGCCGTCATCGAGGGCGTCGCCATCGGCCCGCAGGTCGGTTCCTGCGGCAGCGCAGCCTTCCTGCGCGCGCCGGTCGCGGTGACCGATATCGGCTCCGACCCGCGCTGGCAGGCGTTCAACGCCCTCCCCTGGGCGGCCGGGCTGAGGGCGTGCTGGTCCTGCCCGATCTGCGACGGCCAGGCCCGGGTGATCGCGACCTTCGCCTTCTACTATCGCGAACATCGCGGCCCCACGCCCGTGGAGCTCGAGGCGGTACAGACCTGCACGCATCTGTGCACCATCGCCCTCGAACGTCACGGCCGCGTGCTGGAGCGCGAGCGCCGGGCCTATGTCGACGCGCTCACCGAGTTGCCGAACCGGGCCAGCTTCGACCTGACGCTGGCGCGCCTTCCGACGGCCGAGTACGGCTGCTGGGCGCTGCTCCTGCTCGATATCGACGACTTCAAGGTCGTCAACGACACGTTCGGCCACCAGATCGGCGACGTCCTGCTGGAGACCGTGGCGCGCCGTATCGCCGAGGCCGTGGCGCCGCACACCGCCTTCCGGCTGGGTGGCGACGAGTTCGCCATCGTCGTCGAGGGCGAGGACGTCGCCCAACAGGTCGGCCGGATCGCCGCCGATGCGCTCGCCGCCCTGGCAGCGCCGGTCGAAGGCGAGGATCATGTGCTGATGCCGAGCGCCTCCATCGGCGTGGCGGTCCATCAGCCCGGCGACCGTGACGCCGAGGCCGTGCAGCGCAACGCCGACTTCGCTCTCTATCATGCCAAGGCCACCGACCGCGGCGGCGTCGTCCTGCACGCGCCGCGCCTCGGCAGCGCCATGATGCATCGTGCCGGAGCCGTCCGCGACCTCGCGGAGGCACTGGCGGAGGGCCGGATCGACGCCTATTACCAGCCCGTGGTGCGGCTCGACAGCCGCGAGATCGTCGGCGTGGAGGCCCTGTGCCGACTGATCACCGAGACCGGGCAGCTGGTGCCGGCGGCGGCGTTCCAGGACGCGATGGCCGATGCCCGCATCGCCTCCAAGCTGACCCGCCGCATGATGGAGATCGTGGCTGCGGACGTGCGCCATTGGCTCGACATGGGCCTCCCGTTCCAGCAAGCCTTCGTCAACGTGGCCTCGCCCGACGTCCACGGCGGCTTGCTGGGCCGGCAGATCGCCGAGTGCTTCGGCGCCGCGAAGGTGCCGCTGCACCATGTCGTCATCGAGGTGACCGAGACGGTCTACATGCGTCAGGGCGATCTCGCGGTCCCGCGCGTCATCCGCGAGCTGCGCGCCGACGGGCTGCTCGTCGCCCTGGATGATTTCGGCACGGGCTTCGCCTCGCTCACCCATCTTCTGACCGTGCCTGTCGACATGATCAAGATCGACAAGTCCTTCATCGCCCAGCTCGGCCCCGCCGGGCCGAGCTCGGTGATCGTCGAAGGGCTCGTCGGCATCGCCCGCAAGCTCGGCACCCGCGTCGTCGCGGAGGGCGTCGAGACCGATGGGCAGCTGGCGCTGCTGCGCAATTTCGGCTGCGCTCTCGGCCAGGGCTATCTGTTCTCCGAGCCGGTCGATCGTCACGCCGCCACACGGTTGTTCGAGCGGCGGGTGCTGCCCTTGCGCGGGAGGCCCGTGCCGCCCGGCCACGGGCCGCGCGTCGCCGCCGGAGCCGGCCTGCCCGCCTGA
PROTEIN sequence
Length: 619
MLQLQNLILEMIAKGEPLQATTDRLCLEIEQRLPGVVSSILAIDREGFIHPLSGPSLPRGFSAVIEGVAIGPQVGSCGSAAFLRAPVAVTDIGSDPRWQAFNALPWAAGLRACWSCPICDGQARVIATFAFYYREHRGPTPVELEAVQTCTHLCTIALERHGRVLERERRAYVDALTELPNRASFDLTLARLPTAEYGCWALLLLDIDDFKVVNDTFGHQIGDVLLETVARRIAEAVAPHTAFRLGGDEFAIVVEGEDVAQQVGRIAADALAALAAPVEGEDHVLMPSASIGVAVHQPGDRDAEAVQRNADFALYHAKATDRGGVVLHAPRLGSAMMHRAGAVRDLAEALAEGRIDAYYQPVVRLDSREIVGVEALCRLITETGQLVPAAAFQDAMADARIASKLTRRMMEIVAADVRHWLDMGLPFQQAFVNVASPDVHGGLLGRQIAECFGAAKVPLHHVVIEVTETVYMRQGDLAVPRVIRELRADGLLVALDDFGTGFASLTHLLTVPVDMIKIDKSFIAQLGPAGPSSVIVEGLVGIARKLGTRVVAEGVETDGQLALLRNFGCALGQGYLFSEPVDRHAATRLFERRVLPLRGRPVPPGHGPRVAAGAGLPA*