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berkeley_reactor_200306_biofilm_scaffold_20018_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 14519..15568

Top 3 Functional Annotations

Value Algorithm Source
Putative ornithine cyclodeaminase, mu-crystallin n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I3B0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 343.0
  • Bit_score: 556
  • Evalue 1.60e-155
Putative ornithine cyclodeaminase, mu-crystallin {ECO:0000313|EMBL:KFC63279.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 349.0
  • Bit_score: 568
  • Evalue 4.40e-159
ocd1; ornithine cyclodeaminase similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 349.0
  • Bit_score: 497
  • Evalue 1.90e-138

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGGTTCGCTATGTCGGTGTCGGCAACATGGTCCGGCTGATCGGCGCGGTCGGCATCGAGCCCTATCTCACCGGCCTCGCCGGCTATATCGAAGAGGATTTCCGGCGCTGGGCCGCCTTCGAGAAGGCGCCGCGCGTCGCCAGCCATTCCAGCGACGGCGTCATCGAGCTGATGCCGACCAGCGACGGCGCGCTCTACGGCTTCAAATATGTCAACGGCCATCCCCGCAACACGCGGGCCGGCCTGCAGACCGTCACCGCCTTCGGGGTGCTCGCCGATGTTGGCACCGGCTATCCCCGCCTGCTGGCCGAGATGACCATCGCCACGGCCCTGCGCACGGCCGCGACCTCGGCGCTCGCCGCCCGCTACCTCGCCCGCCGGGATGCCGCCGTCATGGCAATCATCGGGCTCGGCTCGCAATCGGAGTTCCAGGCGCTCGCCTTCAAGGCCCTGCTGGGCATCCGCCGCCTGCGCGTCCACGACATCGATCCCGCCGCCACGGCCAAGTTCCTCGCCAACCTCGCCCCGCACGGCTTCGACATTGCGGTGGCGCCGAGCGCCGGCGAGGCGGTGCTGGGCGCCGACATCGTCACCACGGTCACCGCCGACAAGCAGAAGGCGACCATCCTTTCCGACAACATGGTGGGAGCCGGGCTGCACATCAACGCGGTCGGCGGCGACTGCCCCGGCAAGACCGAGCTCGCCCGCGACATCCTCGCGCGGGCCGACGTCTTCGTCGAGCTGCCGGAGCAGACGCGCATCGAGGGCGAGATCCAGCAGATGCCGGCCGACTTCCCGGTGACCGAGCTTTGGCGGGTGATCGCCGGCGAGGCGCCCGGCCGGCGTGCGCCCGACCAGATCACCCTGTTCGATTCCGTCGGCTTCGCCACCGAGGATTTTTCGGCCCTGCGCTATCTCGACGACCGGATCGAGGGCACCGACTTCTACGAGGAGATCGATCTCCTGACCGAGCCGCAGGACCCGCGCGACCTCTTCGGCCTGCTGGCCCCCGCGACGCCACGCACCCGCACGGCGGCCGGAGCCCGCTGA
PROTEIN sequence
Length: 350
MVRYVGVGNMVRLIGAVGIEPYLTGLAGYIEEDFRRWAAFEKAPRVASHSSDGVIELMPTSDGALYGFKYVNGHPRNTRAGLQTVTAFGVLADVGTGYPRLLAEMTIATALRTAATSALAARYLARRDAAVMAIIGLGSQSEFQALAFKALLGIRRLRVHDIDPAATAKFLANLAPHGFDIAVAPSAGEAVLGADIVTTVTADKQKATILSDNMVGAGLHINAVGGDCPGKTELARDILARADVFVELPEQTRIEGEIQQMPADFPVTELWRVIAGEAPGRRAPDQITLFDSVGFATEDFSALRYLDDRIEGTDFYEEIDLLTEPQDPRDLFGLLAPATPRTRTAAGAR*