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berkeley_reactor_200306_biofilm_scaffold_20018_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21902..23188)

Top 3 Functional Annotations

Value Algorithm Source
N-carbamoyl-L-amino acid hydrolase {ECO:0000313|EMBL:AHK05030.1}; EC=3.5.1.87 {ECO:0000313|EMBL:AHK05030.1};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 410.0
  • Bit_score: 519
  • Evalue 2.90e-144
Amidase, hydantoinase/carbamoylase family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F95_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 406.0
  • Bit_score: 485
  • Evalue 4.30e-134
allantoate amidohydrolase similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 410.0
  • Bit_score: 519
  • Evalue 5.80e-145

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGCCGTCGCGGGACGACCGCCTGTGGAACGATCTGATGGCTCTGGGCGGGCTGACCGATCCGGGCCGGCCCTACACGCGCCGCTGCTTCACGGACCGGTTTCTGGAGGGGCGCCGCTGGCTCTCGCAACGCTTCGAGGACGCGGGCCTGCGGGTGCGCCTCGACGAGGGCGGCAATCTCATCGGGCGCCTCGAGGGCGGCGACCCGTTCTTGCCGGTGCTGGCGATGGGATCCCATTCCGACACGGTGGCGTCGGGAGGCCGTTTCGATGGCCCGCTGGGGGTGCTCGCGGGGCTGGAAGTGGTGCGCAGGCTGCGCGATCGCGGCATCGCCCTGCGCCATCCCGTCGAGATCATCGATTTCCTCAGCGAGGAGCCGAGCGATTACGGCCCATCCTGCATCGGCAGCCGGGCGATGACCGGCTTTCTCGACGAGCCGATGCTGAGCCTTGCGAATGCGGACGGCGAGACCTTGGCATCGGCGATGCGGCGCATGGGGGCCGACCCATCCAGGCTCGCCGGTCCCCGGCGCAACGACGTGGCCGCCTTTCTCGAGCTCCACATCGAGCAGGCGCGCGTCCTGGAGACGCGCGGATGCAATATCGGCATCGTCACCGGCATCGTCGGCATCGCGCGCGTCGAGATCGAATTCACCGGTGCGGCGGACCATGCCGGGACGACACCCTTCCATGTCAGGCAGGATGCCCTGGTGGCGGCAGCCGCCACGATCTCGGCGGTGCGCCGACTGGGCGAAGCCTTCGCCGCCCGCAGCCAGGACTATTTCATCGCGACGACCGGGTGCATCGCCATTCAGCCCAACGCCGCCAATGTCGTGCCGGGCACGGCGCGCCTGGTGATCGAGGCGAGGGCGGAGCGATCCGCGCATCTGTCGGATTTCCTCGACGAGATTTCCCTGGCGAGCCTCGAAGCCGCCTCGGCGGCAAACGTGCAGCGAACCGCGTTTCGACCCTTGTCCCGCTCCGAGCCTGCGCCGAGCGACCCGCGGCTGCGCGAGCATCTCATGGCGGCCGCCGACGCCCTGGCGCTCACCGCGATCCCGATGGCGAGCGGGGCAGGGCACGACGCTGGCTTCATGGCGAGGATTGCGCCGATGGCCATGGTCTTCGTCCCGAGCCGCGACGGGCGCAGCCATTGTCCCGAAGAATGGACCGATGCGGCAGCCTGCAGCGAGGGGGCGTCGGTCCTGTTCGAGGCCCTGTTGCGCATCGACGGCGACGACCGGTTCGCGACCAGGGATGGCGCCTCGAGTCCGGCTCGCTCAGACTAG
PROTEIN sequence
Length: 429
MPSRDDRLWNDLMALGGLTDPGRPYTRRCFTDRFLEGRRWLSQRFEDAGLRVRLDEGGNLIGRLEGGDPFLPVLAMGSHSDTVASGGRFDGPLGVLAGLEVVRRLRDRGIALRHPVEIIDFLSEEPSDYGPSCIGSRAMTGFLDEPMLSLANADGETLASAMRRMGADPSRLAGPRRNDVAAFLELHIEQARVLETRGCNIGIVTGIVGIARVEIEFTGAADHAGTTPFHVRQDALVAAAATISAVRRLGEAFAARSQDYFIATTGCIAIQPNAANVVPGTARLVIEARAERSAHLSDFLDEISLASLEAASAANVQRTAFRPLSRSEPAPSDPRLREHLMAAADALALTAIPMASGAGHDAGFMARIAPMAMVFVPSRDGRSHCPEEWTDAAACSEGASVLFEALLRIDGDDRFATRDGASSPARSD*