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berkeley_reactor_200306_biofilm_scaffold_24940_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(20906..21586)

Top 3 Functional Annotations

Value Algorithm Source
Sarcosine oxidase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEB0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 3.20e-64
sarcosine oxidase similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 9.10e-65
Sarcosine oxidase {ECO:0000313|EMBL:AHB48853.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 4.50e-64

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCCGGCCGAAGCCGAAACCCTGCCGCGCCGCACGCCGCTCTATCGCGTCCTCGACCGGGAGGGCGTCGCCTGGGCCGCGACTTCGGATGCCATGATCGCCGATCCCGCCGGCGCGGCCGCGGGCCTCTGCCTCGCCGACCTCACGCCGCTGCCGCGCCTCGGCTTCAAGGGGCGGGGCACCATCGCCGCCATGCAGGCGCGCGGGGTTGCCGTCGAGGCGCAGCCGAACCGGGCCTTCCGCCAGGCGGACGGCGGGCTCTGCCTGGTGCTGGCGCCGGGCGAGGTGTTCCTGCTCGCCAACCCTGCCGGCGACGGGACGCGCTTTGCCGAGATGGAGCAGGGCTGGCGGATCGAGGACGAGGAGCGGACCTATCCGCTGCCGCGCCGCGACAGCCATGCCTGGTTCGCGGTCACGGGCGAGGCCCTGCCGGGCATGTTCGCAAAAATCTGTGGGATCGACCTGCGATTCCACAAATTCCCGGATCTCACCATTGCCCAAACCTCGGTCGCACGGCTCAATGCCATCGTGGCGCGCGCCGATCTCGGCACGACTCCGGCGTTCCACGTGCTTGCTGACAGTGCTTCTGCCGCATACTTCTGGGAATGCCTGCGCGACGCCGCCGTCGAGTTCGGCGGGCGGATCGTCGGCATCTCGGCGCTGAGAGGATTGACAGGCTGA
PROTEIN sequence
Length: 227
MPAEAETLPRRTPLYRVLDREGVAWAATSDAMIADPAGAAAGLCLADLTPLPRLGFKGRGTIAAMQARGVAVEAQPNRAFRQADGGLCLVLAPGEVFLLANPAGDGTRFAEMEQGWRIEDEERTYPLPRRDSHAWFAVTGEALPGMFAKICGIDLRFHKFPDLTIAQTSVARLNAIVARADLGTTPAFHVLADSASAAYFWECLRDAAVEFGGRIVGISALRGLTG*