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berkeley_reactor_200306_biofilm_scaffold_34479_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(27281..28159)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:KFC70924.1}; EC=2.7.1.58 {ECO:0000313|EMBL:KFC70924.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 290.0
  • Bit_score: 275
  • Evalue 4.90e-71
2-keto-3-deoxy-galactonokinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPB8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 298.0
  • Bit_score: 256
  • Evalue 2.90e-65
2-oxo-3-deoxygalactonate kinase similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 298.0
  • Bit_score: 224
  • Evalue 2.00e-56

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGACGCAGACCCATCTCATCGCCGTCGACTGGGGCACCAGCCGCTTCCGGGCCTACCGGCTCGACGCGGCCGGGGCCGTGCTGGAGCGCGTCGCCGCCGAGGACGGCATGGCGAGCGTGCCTCCCGGCGGCTTTGCCGGCGTGCTGGAGCGCCATTGCGGCGCCTGGATGCGCGAGGCGCCGGCGGCGCCGGTGCTGATGGCGGGCATGGTCGGCTCGCGCAACGGCTGGGCCGAGGCGGCCTATGCCGTCTGCCCCGCCTCGCCCGCCAGCGTCGCCGCCAGCCTGCTCGCGGTGACGGAGCGGGTGTCGATCGTGCCGGGCGTCATCGCCCGCGGCCCGGGCGGGCCGGACGTGATGCGCGGCGAGGAGACGCTGGTGTTCGGCGCCGACGTCGCCGACGGCCTGGTGTGCCTGCCCGGCACCCATTCGAAATGGGCCAGGGTCGAGGCCGGCGCCATCGCCGACTTCGCCACCTTCATGACCGGCGAGAGCTATGCGCTCTATCGCAACCAGAGCCTGCTCGGGCGCCTCGCCGTCGAGCCGGAGGACCTCACCGGCTTCGACGACGGCCTCGAGGCGGCCCGGGCGCCGGGCGGCGTGCTCAACCGCCTGTTCCAGGCGCGGGCGCGGGTGCTGGACGGCGTGATGGACGGGCCGGCGGTCGGCCCCTACCTCTCCGGCCTCCTGATCGGCACGGAGATCGAGGGCGCGTTGCAGCGCTTCGGCGCCGCCGATACGGTGACGCTGGTGGCGGACGGCGTGCTGGCGCAGCGCTATGTCGCGGCGCTGCGCTCGCGCGGCATCGTCATCGAGATCGTCACGCCGGAGAACGCCTTCCTGGCGGGCCTGTCGGCCCTGGCCGAGGCCCGCGCCTGA
PROTEIN sequence
Length: 293
MTQTHLIAVDWGTSRFRAYRLDAAGAVLERVAAEDGMASVPPGGFAGVLERHCGAWMREAPAAPVLMAGMVGSRNGWAEAAYAVCPASPASVAASLLAVTERVSIVPGVIARGPGGPDVMRGEETLVFGADVADGLVCLPGTHSKWARVEAGAIADFATFMTGESYALYRNQSLLGRLAVEPEDLTGFDDGLEAARAPGGVLNRLFQARARVLDGVMDGPAVGPYLSGLLIGTEIEGALQRFGAADTVTLVADGVLAQRYVAALRSRGIVIEIVTPENAFLAGLSALAEARA*