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berkeley_reactor_200306_biofilm_scaffold_34479_55

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 63217..64218

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003685033 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 325.0
  • Bit_score: 529
  • Evalue 1.50e-147
rhamnose ABC transporter, periplasmic rhamnose-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 325.0
  • Bit_score: 526
  • Evalue 3.70e-147
Rhamnose ABC transporter, periplasmic rhamnose-binding protein {ECO:0000313|EMBL:ACS60770.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 325.0
  • Bit_score: 526
  • Evalue 1.80e-146

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGACATCGAAGACGGCGACGTTCGCGGCGCTGGCGCTCGGATCCATGCTGGCCGCCACCGGCGCTCTGGCGCAGCAATGCGCCAGCGGCCCGGTGACGGTCGGGTTCCTGCCCAAGCTCGACACCGACCCCTATTTCCAGGTGGCCAGGACCGGCGCCGAGGAGGCGGCGGCCGAGATCGGCGGCAAGGTGGTGCAGCAGGCGCCGTCCCAGGCCACGGCCGAGGCGCAGATCGAGTTCGTCAACAACCTCGTGGCCCAGAAGGTCGACGTCATCGCCATCGCCGGCAACGATGCCAATGCGGTCGCCCCGGCGTTGAAGCGCGCGGCCAAGCAGGGCGTGCGCGTGGTCGCCTATGACAGCGACGTCGCCGCCGATGCCCGCTCCCTGTTCCTCAACCAGGCCAAGGGCGACAGCCTGGCCGAGATGATGCTGGAGAGCATGGGGCAGATGCTCAACTACGAGGGCGATTTCGCCATCCTGTCCTCGACCCCGACGGCGACCAACCAGAACGCCTGGATCGACTTCATGAAGGCCAGGCTGAAGGAGCCGAAATACGCCAAGATGAAGCTGGTCCAGATCGCCTATGGCGAGGAGAGCGAGCAGGTCAACCAGCAGCAGGCCCTGGCGCTGGTCGAAGCCTTCCCCAACCTCAAGGGCATCATCATTCCCGCCGGCATCGGCCTGCCCGCCGCCGCACGCGCCATGGAGCAGGCCGGCTCCCTCGGCAAGGTCAAGCTCACCGGGCTCGCCCCGGCGACGCTGATCAAGAAGTACATTCAGAACGGCACGGTCCAGGACATCTGGTGGAACGTCAAGGACCTGGGCTACCTCACCTACCACGCCGCCCAGCTCGTCGCGCAGTGCAAGCTCACCGGCAAGGAGGGCGAGAGCTTCAAGGCCGGGCGCCTCGGCGACTACACCGTCGGCGCCAAGGGCGAGGTCGTGCTCGGCCCGGCCCAGATCGTCACGCCCAAGAACGTCGACGAGTTCAAGTTCTGA
PROTEIN sequence
Length: 334
MTSKTATFAALALGSMLAATGALAQQCASGPVTVGFLPKLDTDPYFQVARTGAEEAAAEIGGKVVQQAPSQATAEAQIEFVNNLVAQKVDVIAIAGNDANAVAPALKRAAKQGVRVVAYDSDVAADARSLFLNQAKGDSLAEMMLESMGQMLNYEGDFAILSSTPTATNQNAWIDFMKARLKEPKYAKMKLVQIAYGEESEQVNQQQALALVEAFPNLKGIIIPAGIGLPAAARAMEQAGSLGKVKLTGLAPATLIKKYIQNGTVQDIWWNVKDLGYLTYHAAQLVAQCKLTGKEGESFKAGRLGDYTVGAKGEVVLGPAQIVTPKNVDEFKF*