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berkeley_reactor_200306_biofilm_scaffold_34479_58

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 66276..67595

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDF088 related cluster n=1 Tax=unknown RepID=UPI0003CDF088 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 424.0
  • Bit_score: 681
  • Evalue 3.20e-193
Bicarbonate-binding protein CmpA {ECO:0000313|EMBL:ESY72746.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 424.0
  • Bit_score: 681
  • Evalue 4.50e-193
nrtA; nitrate ABC transporter substrate-binding protein NrtA similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 421.0
  • Bit_score: 679
  • Evalue 4.50e-193

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGACCGGATTTGTCAAAGCTGCCGACAGGCGTGCCGGCGAGCCCAGCCGCCGCGCGGTGATCAAGGGGGCCGCCGGCGCCGCCGCCCTCCTCGCCGCCGCCCGGATCGCTCTGCCTGCCGGCGCCCATGCCGAGGGCGCCGGTCCCGAGGTCGCCGGCGTCAAGCTCGGCTACATCGCCCTGACCGACGCCTCGCCCCTGATCATCGCCAAGGAGAAGGGCCTCTTCGCCAGGCACGGCCTGCCCGATGTCGAGGTGCTGAAGCAGGCGTCCTGGGGTGCCCTGCGCGACAACATGGTGCTGGGCGGCGCCAGCAACGGCATCGACGGCGCCCATATCCTGACGCCGCTGCCCTACCTTATGACCTCAGGCAAGGTGACGCAGAACAACGTGCCGGTGCCGATGGTGATCCTGGCGCGGCTCAACCTCGACTGCCAGGGCATCTCCGTCTCCAACGCGTACAAGGACCTCGGCGTCGGCCTCGACGCCTCCAAGCTCAAGGCGGCCTTCGAGGCCAGGAAGGCGGCGGGCAAGGAGGTCAAGGTCGCCATGACCTTCCCGGGCGGGACCCACGACATGTGGATCCGCTACTGGCTGGCCGCCGCCGGCATCGACCCGGACAAGGACGTCTCCACCATCGTCGTGCCGCCGGCCCAGATGGTGGCGAACATGAAGGTCGGCACCATGGACGCCTTCTGCGTCGGCGAGCCCTGGAACGAGCAGCTCGTCCATCAGGGCATCGGCTTCACCGCAGCCACGACAGGCGAATTGTGGAAGAGGCACCCGGAGAAGTCGCTCGGCCTGCGCGCCGACTGGGTGGAGAAGAACCCGCGGGCGGCGCAGGCCCTGCTGATGGCGGTGCTGGAAGCCCAGCAATGGTGCGACAAGGCAGAAAACAAGGACGAGATGGCGGCGATCGTCGGCCGCCGCCAATGGTTCAACGTGCCGGTCGCCGACATTATCGGCCGCATCAAGGGCGACATCAATTACGGCAATGGCCGCGTCGCCACCGGCACCGACCTCTACATGAAGTTCTGGGCCGGCGGCGCCGCCTTCCCCTATGCCAGCCATGACGCCTGGTTCCTCACCGAGAACATCCGCTGGGGCAAGCTCGCCGCCGACACCGACGTCAAGGCGCTGATCGCCAAGGTGAACCGTGCCGATCTCTGGCGCGAGGCGGCCAAGGCCCTGGGCGTCGCCGCCGCCGACATCCCGGCCGGCGACAGCCGCGGCCCCGAGACCTTCTTCGACGGCAAGGTGTTCGACCCCGCCGACCCCGCCGCCTACCTCAAGAGCCAGACGATCAAGCGCCTGGCGTGA
PROTEIN sequence
Length: 440
MTGFVKAADRRAGEPSRRAVIKGAAGAAALLAAARIALPAGAHAEGAGPEVAGVKLGYIALTDASPLIIAKEKGLFARHGLPDVEVLKQASWGALRDNMVLGGASNGIDGAHILTPLPYLMTSGKVTQNNVPVPMVILARLNLDCQGISVSNAYKDLGVGLDASKLKAAFEARKAAGKEVKVAMTFPGGTHDMWIRYWLAAAGIDPDKDVSTIVVPPAQMVANMKVGTMDAFCVGEPWNEQLVHQGIGFTAATTGELWKRHPEKSLGLRADWVEKNPRAAQALLMAVLEAQQWCDKAENKDEMAAIVGRRQWFNVPVADIIGRIKGDINYGNGRVATGTDLYMKFWAGGAAFPYASHDAWFLTENIRWGKLAADTDVKALIAKVNRADLWREAAKALGVAAADIPAGDSRGPETFFDGKVFDPADPAAYLKSQTIKRLA*