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berkeley_reactor_200306_biofilm_scaffold_37757_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9933..10097)

Top 3 Functional Annotations

Value Algorithm Source
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IR66_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 97
  • Evalue 3.20e-18
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 97
  • Evalue 8.90e-19
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEG07838.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 97
  • Evalue 4.40e-18

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
CGCGGCGGCGTCATCAACACACTCCTCGGCGCCCTCGTCATGGGCATCATCGCCAACATCATGAACCTCGCAGGCGTCCCAGGATACCACCAGCAGGTCTATATGGGCCTCATCATCGTCCTCGCCATGCTCATCCAATATGCAACGGGTTCCCTCAAGCATTGA
PROTEIN sequence
Length: 55
RGGVINTLLGALVMGIIANIMNLAGVPGYHQQVYMGLIIVLAMLIQYATGSLKH*