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berkeley_reactor_200306_biofilm_scaffold_37123_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8626..9642)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI08_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 338.0
  • Bit_score: 560
  • Evalue 6.30e-157
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDX14121.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 333.0
  • Bit_score: 620
  • Evalue 9.40e-175
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 339.0
  • Bit_score: 332
  • Evalue 1.00e-88

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAAAAAAGCACGTCTGACGAAACTGGCGCTCGGCATGGCCGTGCTCGCCGCCGGCCTGTCCTTCGCCAAGGCCCAGGACAAGGGCTTGGAAAACCCGCGCAGCACGGCGTTCCATACCTCGCTGAAGGACAAGAAGGTGGTGTTCGTGCCGCTGTCCATGGGCTTCGACCTGACCGAGGGTTGGGCGGCGCAGATGCGCCGGCAGGCCAGCCGGCTCGGCTACAGCTTCGAGATCCGCGATCCCGCCTGGAGCACCGACGCCGGCACCAAGGCGATCCAGTCGCTGATCAGCGAAAAGCCCGACCTGATGGTGATCCACAATCCCGACATTCAGTCCTATGCCCGGCTGCTCAAGCAGGCGCAGGCGGCCGGCATCAAGATCGTCCAGATCAACCTGGAATCGAACACGACGACCGACTCCTATGTCGGCGCCGACTGGACCGAGATCGGCAGGACGGCGGCCGAGGCCATCGTCGGCAAATGCGACAAGGGCAAGGGCATCTCGACCAAGGTGGCGATCGACACCGGCGTGCCGACTGCCGCCTCCGACGTCTTCCAGCTCGACGGTATCTACAAGGTGCTGAGCGCCCATCCCGACATCCAGGTCGTTTCGCAGCAGGCGACCGAATACAATCCGGAAAAGGCCCGCTCGATCATGGCGACGGTGCTGCAGCAGCATCCAGACCTCTGCGGGGGGATCGGCATCTGGGACAACCAGGACACCGGCACCGCCTCGGCGATCAAGGAAGCCGGCAAGAGCGACCAAGTGTTCCTGGTCACCAGCGGCGGCGGCAACAAGGTCGGCTGCGAGAATGTCGAGAAAGGCTTGTTCAATCTCTACATCAGCTACAACGTGCCGCTGCAGGGCGACCTGCTCAACCAGGAGATTGCCAGGCTCCTGATGTCCGACAGCCCGGCGGGAGAGGTGAAGACCATGTACTTCAATCCTCTCACCCTGATCACCAAGGCCAATGTCAACCAGCGCAACTGTTGGACGCTCGACGATCTGAAATAG
PROTEIN sequence
Length: 339
MKKARLTKLALGMAVLAAGLSFAKAQDKGLENPRSTAFHTSLKDKKVVFVPLSMGFDLTEGWAAQMRRQASRLGYSFEIRDPAWSTDAGTKAIQSLISEKPDLMVIHNPDIQSYARLLKQAQAAGIKIVQINLESNTTTDSYVGADWTEIGRTAAEAIVGKCDKGKGISTKVAIDTGVPTAASDVFQLDGIYKVLSAHPDIQVVSQQATEYNPEKARSIMATVLQQHPDLCGGIGIWDNQDTGTASAIKEAGKSDQVFLVTSGGGNKVGCENVEKGLFNLYISYNVPLQGDLLNQEIARLLMSDSPAGEVKTMYFNPLTLITKANVNQRNCWTLDDLK*