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berkeley_reactor_200306_biofilm_scaffold_37123_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12250..13650

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with HTH domain and aminotransferase domain-containing protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CML0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 457.0
  • Bit_score: 580
  • Evalue 1.40e-162
Transcriptional regulator with HTH domain and aminotransferase domain-containing protein {ECO:0000313|EMBL:CDX14129.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 457.0
  • Bit_score: 721
  • Evalue 7.00e-205
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 457.0
  • Bit_score: 449
  • Evalue 1.00e-123

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGGCAGCCGGTGGCGAACGGAGCGCGCAGCCTGCGACCCTGGTGGACGGCGTCGTCCGCAAGCTGCAGGGCGAGATCGCCGGCGGCGCACTGTCGCCGGGCAGCCGTCTCCTGTCGATCCGCAGGGCCGCGGCGGAGCTCGGCGTGTCCAAGAACACCATCGTCGAGGCCTATGACCGGCTGGTGGCCTCGGGCCATATCGCGGCGAGAGCCGGGTCGGGCTTCGTCGTGGCCGCCGCCGCGGACGCCGCCGCCAGTTCCAGGCCGAAGCACGTCGCGGAGGCGGTCGACGTCGCCTCGCTTCTCGGCGCCCAGCTCGAGCAGAGCTTCCAGATCCGCGTCGGCGACGGCCGGCCGCCGCCGTCATGGACGGAGCAATCCGAGATCCGGCGTCATCTCGGCGCCCCTGGCGGCGCCCTGTCGGCGGACGCCGATGCCTATGGCTCGGCCCTCGGCTTCCTGCCGCTAAGGCAGCAGCTGGCGCGGCGTCTCGCCGACCAGCAGATCCAGGCCGGGCAAGACAACATCCTTCTGACCTTCGGGGCGAACCACGCGCTGGACCTGATCATCCGCGCCATGCTGTCGCCCGGCGACACCGTGCTCGTGGACGAGCCCGGCTACTATCCCCTGTTCGCCAAGCTGACCCTGGCGCAGGTCCGGATGGTCGGCGTCACCCGCACGCCGGACGGACCGAGCCCGGAGGACCTGGCGGCCAAGGCGGCCGGCGAACGGCCAAAGCTGTTCTTCACGCAGTCCCTCGGCCACAACCCGACCGGCGGCTCGGTGACGCTGCCGGTGGCGCATGCGATCCTGACGATCGCCAACCGGCATGGCCTGGTGCTGGTCGAGGACGATCCTTTCGTCGACCTGCCGATCGCCTCCGGCAACAGGCTGGCGACGCTCGACCAGTTGAGCAACGTCATTTCGATCGGCACGTTCTCCAAGACCCTGTCGGCGAGCCTGCGGTCCGGCTTCATCGCCACGCGCGCGGACAGGATTGCGGCCCTCGCCGAGCTCAAAATGCTGACGACGGTCAACAGCTCCGGCTATGTCGAGCGGCTGCTGCACCACCTGCTCGCGGGCGGGCATTACGACCGGCACCTGAAGCGCCTGGGCCAGCGGATCGAGACGGCATCGGGCCGCGTGCAATCGAAGCTGCGGCAGGCCGGCCATCGAATCTTCAGCGACAGCGTCGGCGGATATTACCTCTATCTCCAGCTTCCGCCGGGCGCCGACGATATCGCGCTTGCCCGGGACGGCGCCCGGGAGAGCATCTTCATCGCCCCCGGCAGCGTGTTCTGCGTCGACAAGACCCATCCGCTTGCCAGGGGCATCCGGATCAATGTGTCCCGGGCGGACGACCCGCGATTCTACGATTTTCTCCAGCGCAAGCTGACATAG
PROTEIN sequence
Length: 467
MAAGGERSAQPATLVDGVVRKLQGEIAGGALSPGSRLLSIRRAAAELGVSKNTIVEAYDRLVASGHIAARAGSGFVVAAAADAAASSRPKHVAEAVDVASLLGAQLEQSFQIRVGDGRPPPSWTEQSEIRRHLGAPGGALSADADAYGSALGFLPLRQQLARRLADQQIQAGQDNILLTFGANHALDLIIRAMLSPGDTVLVDEPGYYPLFAKLTLAQVRMVGVTRTPDGPSPEDLAAKAAGERPKLFFTQSLGHNPTGGSVTLPVAHAILTIANRHGLVLVEDDPFVDLPIASGNRLATLDQLSNVISIGTFSKTLSASLRSGFIATRADRIAALAELKMLTTVNSSGYVERLLHHLLAGGHYDRHLKRLGQRIETASGRVQSKLRQAGHRIFSDSVGGYYLYLQLPPGADDIALARDGARESIFIAPGSVFCVDKTHPLARGIRINVSRADDPRFYDFLQRKLT*