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berkeley_reactor_200306_biofilm_scaffold_37123_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20118..20576

Top 3 Functional Annotations

Value Algorithm Source
Excisionase/Xis, DNA-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Y39_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 152.0
  • Bit_score: 212
  • Evalue 2.50e-52
excisionase/Xis, DNA-binding similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 152.0
  • Bit_score: 212
  • Evalue 7.00e-53
Excisionase/Xis, DNA-binding {ECO:0000313|EMBL:ABD89947.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 152.0
  • Bit_score: 212
  • Evalue 3.50e-52

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGACAATTCCTGCTTTTGCCGGGGGGCTCGGGGCGCGGCTGCCGAACGAACGGGAAAGAGCTGCCGCAAACCAGATGAGGAAAATCCTCGCGAGCAGCCTCACGACCGATGCTAGGTTTCGTGTCGTTGCCGACGACACGAAGCAAGACACCGAGATTGTGCTGACACCGGCACTTTCGAGCCTCCTCATGGAGCTACTGCGCCACGTCGGATCAGGAGACGCAGTCACGCTGGTACCGGTCAGCAAAATGCTGACGACACAGCAAGCGGCGGACATTCTCAATGTTTCACGGCCGTTTCTGATCTCAATCCTCGAAAGGGGCGATATTCAGTTCACGACTACCGGCAGGCATCGCCGCATCAAGGCAATGGATCTGTTTGAGTATAAGAAGAAGCGCGACGCGAAGCGCGGTGAAGCACTCGCAACCCTTGCCGAAATGGATGCAGAATTTCTGTAA
PROTEIN sequence
Length: 153
MTIPAFAGGLGARLPNERERAAANQMRKILASSLTTDARFRVVADDTKQDTEIVLTPALSSLLMELLRHVGSGDAVTLVPVSKMLTTQQAADILNVSRPFLISILERGDIQFTTTGRHRRIKAMDLFEYKKKRDAKRGEALATLAEMDAEFL*