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berkeley_reactor_200306_biofilm_scaffold_37123_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(21380..22849)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003651980 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 368.0
  • Bit_score: 216
  • Evalue 5.50e-53
Cell wall hydrolase, SleB {ECO:0000313|EMBL:KFC73388.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 483.0
  • Bit_score: 193
  • Evalue 4.10e-46
cell wall hydrolase SleB similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 413.0
  • Bit_score: 190
  • Evalue 7.00e-46

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGGTTGCGTCGCGTTGGTCCGCCGTTTGTGCGCTTGTCGCTCCGACCCTGATGGTCGGCAGCGTCCTCCTGTGGCAGCGCGCGAACCCGGCGGCTCCGTTCCTTCCCGAGCCGGCCTCCGCGGCCCGGCCCGCCGCCCAGCCGACGCCGCGCCAGGCGCTGCTCTCGGCCGGCACCACCCGCATCATCCGCGCCGGCGTGTTTCAGATGCCGTCGCTGAACCTGGCCGACCTCGCCGTCGGGCCCCTGACCGCGCCGTCGGCGGAGAGCCTGGGCCGCCGCGCCGCCGCCCCGGCCTGCCGCGACGCTGCCGTGCCGCTGGACTTCCGGCCGGATCCGGAAGGCCGCACCTCCTGCCTGGTGCGCCAGGCGGCCCTGGAGATCATGCCCGAGGACGGCTTCGACACGGAGCCGCCGCCCGAGGAGGGCGATATCCCCGGCGATCCCATCCGCGACGGCCTCAAGGCCGGCGCCACGGGCTGGCCGACGGTCGACCGCTCGGCCAAGGGCGACCAGCGCGTGCCCGGCCTGCGCCCCAGCGTCAGCGAGGCGCATGGCCTGGTGCCGATGGATCCGCTGCTGCCGGACGAGGGCGCGCCGCCGCTCGCCCAGATGCCCAGCTTGCTCGACCCGCTCGCCCTCGGCGCGCCGCCGGAGCGCTTCCGCCAGACGCATATCGATGCGGGCCTCGCCGCGATCATCGCCGAGCGCCTGCGCCGGCCCGCATCCGAGTCCGACGAGGGCGAAGGCGCCGTGCCGCTCGACCACAGCCTGGCGCCCACCGGCGGCACCTCGCCGGCCGCCAGCCGGCCCGACCTCGCCCATCTCGACAGCCGCACCACCGGCCCGGACGGCGAGGCGCCGATCCAGCTCACCGCCCTGCCGGCCGATGCCGTCGTCACCATGGCCGCCGTGCGTCCCACGCCCGGGCTCGGCGAGGCCACGCCGGCCATCGGCCCGGACGAGGGTCTCACCACCCAGCCCAAGAGCGGCCAGATCGCCGGCCTGCCCGGCCTCGACGACGGCCAGCCGCGCCCGCTCACCCTGCCGCCGGTCGCCTATACCAGGGCGCAGATCTGCCTCGCCACGGCCGTCTATTTCGAGGCGCGCGGCGAGAGCGAGAAGGGCCAGATCGCCGTGGCCCAGGTGGTGATCAACCGGGTGCGCTCGCCCTACTACCCCAAGAACGTCTGCGACGTGGTCTACCAGGGCGCCAGCGAGCGGCGCTGGGGCGGCTGCCAGTTCTCCTTCGCCTGCGACCGCATCAAGGACCGCATCACCGAGGATGGCCCGTGGAAGGCAGCGCTTTCCATCGCCCAGAAGGTGATGGACGCCGAGCTCTGGCTGCCGGATGTCGGCAACGCCACCCACTACCACGCCACCTATGTCCGGCCCTACTGGGTGCGCGACATGCGCGAGATGGACCGGATCGGCCGGCACATCTTCTACCGGGTGAAGTGGTGGACGTGA
PROTEIN sequence
Length: 490
MVASRWSAVCALVAPTLMVGSVLLWQRANPAAPFLPEPASAARPAAQPTPRQALLSAGTTRIIRAGVFQMPSLNLADLAVGPLTAPSAESLGRRAAAPACRDAAVPLDFRPDPEGRTSCLVRQAALEIMPEDGFDTEPPPEEGDIPGDPIRDGLKAGATGWPTVDRSAKGDQRVPGLRPSVSEAHGLVPMDPLLPDEGAPPLAQMPSLLDPLALGAPPERFRQTHIDAGLAAIIAERLRRPASESDEGEGAVPLDHSLAPTGGTSPAASRPDLAHLDSRTTGPDGEAPIQLTALPADAVVTMAAVRPTPGLGEATPAIGPDEGLTTQPKSGQIAGLPGLDDGQPRPLTLPPVAYTRAQICLATAVYFEARGESEKGQIAVAQVVINRVRSPYYPKNVCDVVYQGASERRWGGCQFSFACDRIKDRITEDGPWKAALSIAQKVMDAELWLPDVGNATHYHATYVRPYWVRDMREMDRIGRHIFYRVKWWT*