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berkeley_reactor_200306_biofilm_scaffold_37123_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 30052..30645

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 181.0
  • Bit_score: 229
  • Evalue 2.70e-57
Ribonuclease HII n=1 Tax=Rhizobium sp. CF080 RepID=J2QAQ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 181.0
  • Bit_score: 224
  • Evalue 4.80e-56
Ribonuclease HII similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 181.0
  • Bit_score: 224
  • Evalue 1.80e-56

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Taxonomy

Rhizobium sp. R2-400B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCCAACGAGCGGTGGAACCCGGCGGAGCTGGTCGCGGGCGTCGACGAAGCCGGACGCGGCCCGCTGGCCGGTCCGGTGGCGGCAGCGGCGGTGATTCTCGATCCCGAGCGCATTCCCGCCGGGCTCGACGATTCCAAGGCGCTCAGCGCCGCCGTGCGCGAGACGCTGTTCGAGACGATCATGCGCGAGGCGGTGGCCGTCTCCATCGCCATGGCCGGGCCGGCGACGATCGACCGCATCAACATCCGTGCCGCCACGCTCGACGCCATGCGGCGGGCCGTGCAGGGCCTCGCCCACCGCCCGGCCCGCGCCGAGATCGACGGCAAGGACGTGCCGCCCGGCCTGCCCTGCCCCGGCCGCGCCATCGTCGACGGCGACGCGCTGGTGGCGGCGATCTCGGCCGCCTCGATCGTCGCCAAGGTGACGCGCGACCGGCTGATGACGCGCCTGGCCGCCGAGTTCCCGGTCTACGGCTTCGAGCGCCACATGGGCTACGGCACGGCCGAGCACCGGGCGGCGATCACGGCGCACGGGCCCTGCGTGCATCACCGCTTCTCCTTCGGCCTCCTCAAGACGATGCGGGCGGGCTGA
PROTEIN sequence
Length: 198
MANERWNPAELVAGVDEAGRGPLAGPVAAAAVILDPERIPAGLDDSKALSAAVRETLFETIMREAVAVSIAMAGPATIDRINIRAATLDAMRRAVQGLAHRPARAEIDGKDVPPGLPCPGRAIVDGDALVAAISAASIVAKVTRDRLMTRLAAEFPVYGFERHMGYGTAEHRAAITAHGPCVHHRFSFGLLKTMRAG*