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berkeley_reactor_200306_biofilm_scaffold_45995_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7616..8707

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 358.0
  • Bit_score: 520
  • Evalue 3.70e-145
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 358.0
  • Bit_score: 520
  • Evalue 1.90e-144
DNA polymerase IV n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QH04_BRESC similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 358.0
  • Bit_score: 520
  • Evalue 1.30e-144

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Taxonomy

Brevundimonas subvibrioides → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGAGCGATGCCGGTCCGCGCAAGATCATCCATATCGACATGGACGCCTTCTACGCGTCGGTCGAGCAGCGTGACGACCCCGCCTTGCGCGGTCGCCCCGTGGCGGTGGGATATGCCGCCAGGCGCGGCGTCGTCGCCGCCGCGAGCTACGAGGCGCGGGCCTACGGCGTGCGCTCGGCCATGCCCTCGACGACGGCGCTGCGCAAATGCCCCGAGCTGATGTTCGTGGCGCCGCGATTCGAAATCTATCGGGCGGTGTCGCGGCAGATCCATGCCATCCTGGCCGACTATACCCCGCTGGTCGAGCCCCTCTCGCTCGACGAAGCCTATCTCGACGTCACCCGCAATCTGCGTGCGCCTGCGACCGCGTCGGCGACGGCGAGCGAGATCCGCGCCCGCATCCTCGCCGAGACCGGCCTCACCGCCTCGGCCGGCATCTCCTACAACAAGTTCCTCGCCAAGCTCGCCTCGGACCAGCGCAAGCCGAACGGGCAGTTCGTGATCACCCCAGCCGCGGGGCCTGGCTTCGTCGCGGCCTTGCCGGTCGGCCGCTTCCATGGCGTCGGGCCGGTCACCGCCGAAAAGATGAACCGGCTCGGCATCTTCTCCGGCGCCGATCTCATGCGTCAGCCGCTGGCCTTCCTCATGGCGCATTTCGGCAAGGCCGGGCCGTGGTACCACGCCATCGCCCGGGGCGAGGACGATCGCCCGGTGGTGCCGGACCGGCCGCGCAAGTCGTCGGGATCGGAGACCACCTATGCCGACGACCTGACCGAGCCGGCCGCCGTCGAAGCCGGGGTGCGGGCCATGGCGGACGAGGTCTGGGCCTGGTGCGAGAAGGCGCAGGCCTTCGGCCGCACCGTGACCGTGAAGATCCGCTATGCCGATTTCAGGCAGGCGACGCGCAGCCGCACCCTGCCGGCTCCGGTGACATCGCGCGAGGCCCTGCACGATGTCAGCCTGGCCCTGGCGCGCAGCGTCTTCCCGCTGGTCGCCGGCATCCGCCTCATCGGCGTGACGCTGTCCGGCTTCGAGCCCGCCGCCCACGAGGCCTCCGGGCAGCTCGACCTCGGGTTGGAGCCGGCGTCCTGA
PROTEIN sequence
Length: 364
MSDAGPRKIIHIDMDAFYASVEQRDDPALRGRPVAVGYAARRGVVAAASYEARAYGVRSAMPSTTALRKCPELMFVAPRFEIYRAVSRQIHAILADYTPLVEPLSLDEAYLDVTRNLRAPATASATASEIRARILAETGLTASAGISYNKFLAKLASDQRKPNGQFVITPAAGPGFVAALPVGRFHGVGPVTAEKMNRLGIFSGADLMRQPLAFLMAHFGKAGPWYHAIARGEDDRPVVPDRPRKSSGSETTYADDLTEPAAVEAGVRAMADEVWAWCEKAQAFGRTVTVKIRYADFRQATRSRTLPAPVTSREALHDVSLALARSVFPLVAGIRLIGVTLSGFEPAAHEASGQLDLGLEPAS*