ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_45995_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9005..9985

Top 3 Functional Annotations

Value Algorithm Source
gpuA; agmatinase (EC:3.5.3.11) similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 317.0
  • Bit_score: 523
  • Evalue 3.00e-146
Agmatinase {ECO:0000313|EMBL:CDM60990.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CDM60990.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 317.0
  • Bit_score: 523
  • Evalue 1.50e-145
agmatinase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000366372E similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 312.0
  • Bit_score: 530
  • Evalue 8.80e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCACGAGAGCTTTCAACCTGTCGATGCGGCGCTGGTTCCCCGGTTCGCCGGGGTGGCGACCTTCATGCGGCTGCCGCTCGTCGCCTCGGCCGAAGGGCTCGACATTGCGCTCTACGGCGTGCCCTGGGACGGTGGCACCACCAACCGCGCCGGCGCCCGCCACGGCCCGCGCGAGGTGCGCAACCAGTCGAGCCTGGTGCGCCGCGTCCACCACGTCTCCGGCACCGAGCCGTTCAGCCTCGCCCGCGTCGCCGATATCGGCGACCTCTCGGTCAATCCCATCGACCTCAAGGACGGCCTCGCCCGCATCGAGGCCGGGGTCGCGGCGATCGCCGCCGCCGGCGCCATCCCGCTCGGCATCGGCGGCGATCATCTCGTCACCCTGCCGGTGCTGCGCGCCGTGGCACGAGCCCGGCCGGTCGGGCTCATCCATTTCGATGCGCATTCCGACACCAACGACACCTATTTCGGCGACAATCGCTACACCCACGGCACGCCCTTCCGACGGGCGGTCGAGGAAGGGCTGATCGATCCCCGACGCACCGTCCAGATCGGCATCCGCGGCTCGATCTATGATCCGGCCGAGCACGATTGGGCTCGGGCCCAGGGCATGCGCGTCGTCTACATGGAGGAATTCGTCGCCCGCGGCCCGCTCGAGATCATGGCCGAGGCCCGGCGCATCGTCGGCGATGCGCCGACCTACGTTTCCTTCGACATCGACAGCATCGATCCATCCATGGCGCCTGGCACCGGCACGCCCGAGATCGGCGGCTTTTCCACCCGCGAGGCGCAGCAGATGGTGCGGCTGCTCGATGGCGTCGCCATTGTGGGCGCCGACGTGGTCGAAGTGGCGCCGCCCTTCGACGTGGCGGGCCTGACCGCGCTCGCCGGGGCGACCATGGCCTTCGAGCTGCTCTGCGTCATCGCCAGGAGCCTGGCGGCGCGGCGCAGGGCCGGGGGGCTCCCCGGGGAGCCGTAG
PROTEIN sequence
Length: 327
MHESFQPVDAALVPRFAGVATFMRLPLVASAEGLDIALYGVPWDGGTTNRAGARHGPREVRNQSSLVRRVHHVSGTEPFSLARVADIGDLSVNPIDLKDGLARIEAGVAAIAAAGAIPLGIGGDHLVTLPVLRAVARARPVGLIHFDAHSDTNDTYFGDNRYTHGTPFRRAVEEGLIDPRRTVQIGIRGSIYDPAEHDWARAQGMRVVYMEEFVARGPLEIMAEARRIVGDAPTYVSFDIDSIDPSMAPGTGTPEIGGFSTREAQQMVRLLDGVAIVGADVVEVAPPFDVAGLTALAGATMAFELLCVIARSLAARRRAGGLPGEP*