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berkeley_reactor_200306_biofilm_scaffold_46954_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2424..3749)

Top 3 Functional Annotations

Value Algorithm Source
Capsule polysaccharide export inner-membrane protein n=1 Tax=Actinobacillus minor NM305 RepID=C5S344_9PAST similarity UNIREF
DB: UNIREF100
  • Identity: 26.8
  • Coverage: 396.0
  • Bit_score: 162
  • Evalue 5.00e-37
Capsule polysaccharide export inner-membrane protein {ECO:0000313|EMBL:EER46673.1}; TaxID=637911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus minor NM305.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.8
  • Coverage: 396.0
  • Bit_score: 162
  • Evalue 7.00e-37
Capsule polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 416.0
  • Bit_score: 161
  • Evalue 4.10e-37

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Taxonomy

Actinobacillus minor → Actinobacillus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGACGACGTCTCCCAGGCCATTGAAGCTTTTAAAGCCCTTTGAGACGCTTCGACGGCGCCAGAGGGAGGATTTCGACGAGGAGTCCTTTGTCGATTTCGAGGATGAGCGCCCGGTAACGACGCGGCCGTCGTTTGAGCTGATCACGCCTCTTAGCGCCGAGGCGATTCGTCGTAAACGAATCCGCTCTTGGGCCGTCGGTTTGGCTGTGCTGCTAGCACCAATGGTGCTTACGGCTGTCTATCTTGGTTTCATTGCCGAGCCTGTCTATCAGGTCGAAGCCATTATTATGATCAGGAACCCGCCAAGCAGTGGCGGTGGCGGTGGCGGTGGAGGAGGGGGGCTTACCGCTCTCCTCAAGGGTGGCGGCGGTGGCGGAGCCTCAATCATGTCGCGAGCCATGGATGAATCCTTCGCAGTGATTCAGTACATTGCTTCCCGCGAGGCGTATATCGAATTGGAACAGCGCATCGGTAAGGACAAGGTTTTCCAATCCGATACCGCCAACCAGAAGCCGACGTCAGCAAACCTCTGGACTTCTTGGGCGGGGTCGCCAACCAGCACCAGTTTCGAAGACAGATTTGCTTACTATACAGATCATGTTAATGTTTCCTTCGATGAAATTACCGGGCAGATCGACTTAAAGGTCCTCGGGCATGATGCTAAAGCGTCCAACCAGGTCGCAATTGTTTTGCTTGCAATGTCTGAGGAACTAGTTAACCAGTTCAATTCACGATCCGAGAGGGATTTTATTGAGCACAACAAGAAGGAGGTTGAACGAACGCACGATGAGTTCAATGCGACATCGGATCAAATCACGAAATTTCGCTTCGATCACAATCTAATCGATCCGAACTTTGACGGTTCGGCCGTTGGTGGGATCATTACTGGTTTATTGACCGCGGCCACAAGCGTACAGGCTGAGATTTCGAACATGATTGGCCGCGGCATGACTTCAGATGCGCAACTGCGTCCGTTGCGCATACGTTTGGCCGCCCTACAGGAGCAAATCCAACAACAGAAGTCGCAGCTAACAGGGCAAGGTAATTCGCTTGCTCCCGTTTTGACACAGTATGCGACGCTCGGTCTGGCCCAACAGATCGCGCAGCAGCAATATACTTCAGCTCTTAACAACTTGGCGGCTGCTACCTTTCAAGCGAATTCTCAGAAACTTTACATTGTTAATGTGGTGTCTCCTTACCCTCCTGAGGAGGCACAGTTTCCCGATCGCCGCCGAGCAATGACGCTTGCGATCATTTTCTCGGTCGTGGGGTTCGCTGTTTTTCGCACTGTCGCTTCTGCGATACGTGATCATATGGTTGGATAG
PROTEIN sequence
Length: 442
MTTSPRPLKLLKPFETLRRRQREDFDEESFVDFEDERPVTTRPSFELITPLSAEAIRRKRIRSWAVGLAVLLAPMVLTAVYLGFIAEPVYQVEAIIMIRNPPSSGGGGGGGGGGLTALLKGGGGGGASIMSRAMDESFAVIQYIASREAYIELEQRIGKDKVFQSDTANQKPTSANLWTSWAGSPTSTSFEDRFAYYTDHVNVSFDEITGQIDLKVLGHDAKASNQVAIVLLAMSEELVNQFNSRSERDFIEHNKKEVERTHDEFNATSDQITKFRFDHNLIDPNFDGSAVGGIITGLLTAATSVQAEISNMIGRGMTSDAQLRPLRIRLAALQEQIQQQKSQLTGQGNSLAPVLTQYATLGLAQQIAQQQYTSALNNLAAATFQANSQKLYIVNVVSPYPPEEAQFPDRRRAMTLAIIFSVVGFAVFRTVASAIRDHMVG*