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berkeley_reactor_200306_biofilm_scaffold_46954_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4573..5361)

Top 3 Functional Annotations

Value Algorithm Source
Putative cell surface polysaccharide export ABC-2 transporter permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2C9U5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 25.3
  • Coverage: 241.0
  • Bit_score: 76
  • Evalue 2.80e-11
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.3
  • Coverage: 241.0
  • Bit_score: 76
  • Evalue 3.90e-11

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Taxonomy

Oceanicola granulosus → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGGTCAGCGGGATATTGAACGGTGTCGATCGGTATTTCTCCGTCTTTTGGGCGATTCTGAAGCGCGAAACTTCACTTAGATTCGGTGCTCGTTCGCTTGGATGGATCGAGGAGGCCGGCGCCATCGCGGTGCATATAATTGCATTCTGTACGCTACGTATCATTCTTGGTGGCGGTAATCACGATGGCATGGAAGATTTACCGTTTACAACAATAGGTGTAATGGCATTCTGGCAAATTCGCACGGGTATTTCTATTGTCTCTATGACACCTCAGACGATGATTCGTTATTCGGAATTTCCACAGGTTACCCTTCTCGATGTCGCCATTGCAAAAGGGATAATCAATCTCTTACTATGTCTGGCTGTTGCTTTTTCGACATTCTATATTTTGCAGATTATCGGCTATTCGCGCCCGATAAGGGACACCTTGATGGTTTTATACTGGCTGGTGATGTCTGGAATTCTCGGAATCGCATGTGGTCTTTTTTTGATGTGGCCATTCTATATCTTTCCATTTACAAGAACTGTACTGTTAGTATTGATCGTTAGGCTCTTGTCGATCATTTCTGGAGTATTTTTTGTCTACACTGATCTGCCTTATCCTCTTCGCGCGATCGCCCAGTGGTTCCCTCCGCTCCAAATCAACGATAAAATTCGAGAAGCATACTTCTATACATATCATGCAACCTGGGTAGACGAAAATTTCTGCTTTCTTTCGACTTTGTTAATTTTTGCTATAGGGCTATTGAGCTGCGAGTTGGTCCGTGGAAAACTAAAGAAAGGATGA
PROTEIN sequence
Length: 263
MVSGILNGVDRYFSVFWAILKRETSLRFGARSLGWIEEAGAIAVHIIAFCTLRIILGGGNHDGMEDLPFTTIGVMAFWQIRTGISIVSMTPQTMIRYSEFPQVTLLDVAIAKGIINLLLCLAVAFSTFYILQIIGYSRPIRDTLMVLYWLVMSGILGIACGLFLMWPFYIFPFTRTVLLVLIVRLLSIISGVFFVYTDLPYPLRAIAQWFPPLQINDKIREAYFYTYHATWVDENFCFLSTLLIFAIGLLSCELVRGKLKKG*