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berkeley_reactor_200306_biofilm_scaffold_46954_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15544..17163)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase n=1 Tax=Xanthobacteraceae RepID=UPI0003739A0A similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 547.0
  • Bit_score: 803
  • Evalue 8.90e-230
ATP dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 547.0
  • Bit_score: 801
  • Evalue 1.30e-229
ATP dependent DNA ligase {ECO:0000313|EMBL:ADH87405.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 547.0
  • Bit_score: 801
  • Evalue 6.20e-229

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
GTGAACCGCTTCGCCGAGCTGCTCGACCGCCTGGCCTACGAGCCGCGCCGCAACGCCAAGCTCAGGCTGCTCACCGCCTATTTCCGGGAGACGCCCGACCCGGACCGAGGCTTCGCCCTCGCCGCGCTCACCGGCAACCTCGTCTTCCGTCATGCCAAGCCCGGGCTGATCCGCGCCCTGGTCGCCGAGCGCACCGACCCCGAGCTGTTCGCGCTCTCCTACGACTTCGTCGGCGACCTCTCCGAGACCGTGGCGCTGATCTGGCCGGCGAGGGCCGGCGCCAACCGCTCGCCCACGCTCGCCGAGGTGGTGGCGGCGCTCACCCATACCGGCAAGAGCGAGCTGCCCGGTGTGATCGCCCGCCTGCTCGACGCGCTGGACGAGACCGGGCGCTGGGCGCTCCTGAAGCTGATCACCGGAGCGCTGCGCATCGGCGCATCGGCGCGCCTGGCCAAGACCGCGGTGGCGATGCTGGGCGAGCAGAGCGCCGACGAGGTCGAGCTGGCCTGGCCCGGCCTCGCCCCGCCCTATGCCGCGCTCTTCGCCTGGGTGGAGGGGCGGGCCGGGCGGCCCGAGACCCGCGACCCCGCGCCGTTCCGCCCGGTGATGCTGTCGCACGCCCTGGAGGAGGCCGACCTCTCCGCCATCGACCCGGAGGCGTTCGTCGCCGAATGGAAATGGGACGGCATCCGCGTCCAGGCGGTCGGCGGGCCGGCCGGCGAGGGGCGGGTGATGCGGCTCTATTCGCGCACCGGCGAGGATATTTCCGCTGCCTTCCCCGACCTGATGGAGGCGCTTTCCTTCGACGGCGCCGTCGACGGCGAGCTCCTGGTGCGGCGCGAGGAGCTGGTGCGCAGCTTCAACGTGCTGCAGCAGCGGCTGAACCGCAAGACGGTGACGCCGCGCCTCGCGCTCGACTATCCCGCCCATATCCGCGCCTACGACCTCCTGGCCGAGGGCGGGGAGGACCTGCGCGAATTGTCCTTCGTCGAACGGCGCCGGCGCCTGGAGGCTTTCGTCGCCCGGCTCGGCGAGCCGCGGCTCGACCTCTCGCCCCTGGTGCCCTTCGCCGACGTGGCGGCGCTGGCGGCGGCGCGTGCCGATCCGGCGGCGGCCGGCGCCGGCCCGGACGCCGAGGCCGTCGAGGGCATCATGCTCAAGCGCCGCGACAGCCCCTATCTGCCGGGCCGGCCGAAGGGCTTCTGGTTCAAGTGGAAGCGCGAGCCCTTCAACGTCGATGCCGTGCTGATGTATGCCCAGCGCGGCCACGGCAAGCGCTCCTCCTTCTATTCCGACTACACCTTCGGCGTCTGGACGGAGGAGGGCATCCTGGTGCCGGTCGGCAAGGCCTATTTCGGCTTCACCGACGAGGAGCTCCTGGAGATCGACCGATTCGTGCGCCGCAACACGCTGAACCGCTTCGGCCCGGTGCGCGAGGTGACGCACGAGCCCGACAAGGGGCTGGTGTTCGAGGTGGCGTTCGAAGGCATCGCCCGCTCGACCCGCCACAAGTCGGGCGTCGCCATGCGCTTTCCCCGCATCGCCCGCATCCGCTGGGACAAGCCGCCGCGCGAGGCCGACCGGCTGGAGACGCTGATCGGCATGATCAAGGTGGAATGA
PROTEIN sequence
Length: 540
VNRFAELLDRLAYEPRRNAKLRLLTAYFRETPDPDRGFALAALTGNLVFRHAKPGLIRALVAERTDPELFALSYDFVGDLSETVALIWPARAGANRSPTLAEVVAALTHTGKSELPGVIARLLDALDETGRWALLKLITGALRIGASARLAKTAVAMLGEQSADEVELAWPGLAPPYAALFAWVEGRAGRPETRDPAPFRPVMLSHALEEADLSAIDPEAFVAEWKWDGIRVQAVGGPAGEGRVMRLYSRTGEDISAAFPDLMEALSFDGAVDGELLVRREELVRSFNVLQQRLNRKTVTPRLALDYPAHIRAYDLLAEGGEDLRELSFVERRRRLEAFVARLGEPRLDLSPLVPFADVAALAAARADPAAAGAGPDAEAVEGIMLKRRDSPYLPGRPKGFWFKWKREPFNVDAVLMYAQRGHGKRSSFYSDYTFGVWTEEGILVPVGKAYFGFTDEELLEIDRFVRRNTLNRFGPVREVTHEPDKGLVFEVAFEGIARSTRHKSGVAMRFPRIARIRWDKPPREADRLETLIGMIKVE*