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berkeley_reactor_200306_biofilm_scaffold_48742_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19567..20400

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000379B402 similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 274.0
  • Bit_score: 405
  • Evalue 3.60e-110
Inosose dehydratase {ECO:0000313|EMBL:GAD57259.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 274.0
  • Bit_score: 370
  • Evalue 1.80e-99
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 264.0
  • Bit_score: 342
  • Evalue 1.10e-91

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Taxonomy

Loktanella cinnabarina → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGAGCCGCTGGCGCCTCGCCTATCATGCCAATTGCTGGGGGCCGCTCGGCGGCAACGCCGTCGGCGTCACCTCGATCACGCAGCTCACCTACCGGACCTTCGGCGACATGGCGCGGGCCGCCCGCGAGATCGCCGCCGCCGGCTACGAGGGCATCGAGCTGTTCGACGGCAACCTGCTCGACGGCGAGGGCGACGGCTTTCGCGATCTCCGCACCGCCCTGGAGGCGACGGGCCTGAGGCTCGTCTCGACCTATAGCGGCGCCAATTTCGTCTTCGGCGAGATCTTGGAGGAGGAGCTCGCCCGCATCGAGCGTGCGGCCCGGGCCGCGGCCGCGCTCGGGGCCGAGCACCTCGTGGTCGGCGGCGGCGCCAAGCGGGCGAGGGGCCTGGCGGGCGGAGATTTCGACGCGCTCGCCCGCGGGCTCGACCGCGTGGTGGCGCTCGCCCGCGCGCATGGGCTGAACGCCCATTATCATCCGCATCTCTCCACCATCGTCGAGAGGCCGGACGAGGTCCGCCGCATCTTCGGCAAGACCGGTATCGGCTTCTGCCCGGACACGGCGCATCTTGCCGCCGCCGGCGGCGTGCCGGCAGAGATGGTGCGCGAGCACGCCGGCCGGATCTCCTATGTCCATCTCAAGGGCTGGCGGCGCGATCCCTTCGCCTTCACCCCGGTCGACGAAGGCGACTGCGACAACGCCGCCGTGCTGCAGGCGCTCGCCGAGATCGGCTATCGCGGCTGGATCACCAACGAGCTCGACAGCTGGCCCGACCCGGCCGAGGGCGCGCGCCGCGGCCACGCCTTCGTCAAGGCGCGCATGCCTGCGGACTGA
PROTEIN sequence
Length: 278
MSRWRLAYHANCWGPLGGNAVGVTSITQLTYRTFGDMARAAREIAAAGYEGIELFDGNLLDGEGDGFRDLRTALEATGLRLVSTYSGANFVFGEILEEELARIERAARAAAALGAEHLVVGGGAKRARGLAGGDFDALARGLDRVVALARAHGLNAHYHPHLSTIVERPDEVRRIFGKTGIGFCPDTAHLAAAGGVPAEMVREHAGRISYVHLKGWRRDPFAFTPVDEGDCDNAAVLQALAEIGYRGWITNELDSWPDPAEGARRGHAFVKARMPAD*