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berkeley_reactor_200306_biofilm_scaffold_41009_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(7365..9509)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000365D0E3 similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 712.0
  • Bit_score: 797
  • Evalue 1.10e-227
PAS sensor protein {ECO:0000313|EMBL:KFB09357.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 702.0
  • Bit_score: 791
  • Evalue 8.50e-226
multi-sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 710.0
  • Bit_score: 752
  • Evalue 6.80e-215

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Taxonomy

Nitratireductor basaltis → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2145
GTGCGGAAGCCCGGCGTGAGCGACGACCTCGATCTCGCCGCCTGCGATCGCGAGCCGATCCACATCCCCGGATCGATCCAGCCGCATGGGCTGATGCTGGTGCTCGACCCCGCCACCACGGCGGTGCGGCAGGGCGCCGGCGACATCGAAGGCCGCCTCGGCCGCGCGGATTGGATCGGCCTGCCCTGCGCGGAGCTGCTGGGCGCCGCGACCGCCGCGGCCGTGGCAGCCGCCGAGCGGGGCACGCTGCGGCAGGTCGCGGTGCCCGGCGGGGCCGAGAGCTTCGACGGCGCCTTCCATCGCGCCGGAGACGCCGTGATCGTCGAGCTCGAGCCGGCCGCTTCCGCCGCCTCCAGCGCCGCGCTCCTGCCGCAGCTGGAGGCGGCGGCCGCCGCCTTCGAGCGGGCGGCCGACCTCAGGCAGCTCTGCGCCGTCGCGGCGGTCGAGTTCCGCCGCCTGATCGGCTACGACCGCGTGATGGTCTACCAGTTCCTGGAGGACGATGCCGGCGTCGTCCTCGCCGAGGACGCAGCGGCAGGCCAGCGTTCCTTTCTCAACCACCATTTTCCGGCCGCCGACATTCCGCGGCAGGCGCGGGCGCTCTACGTCCGCAACCTCGTGCGCGTCATTCCGGACGTCGCCTACCGGCCGGCGCCGCTGGTGCCTGCTGCCCGGCCGGCCGCCGAGCCGCTCGATATGAGCGACTGCGCCTTGCGCAGCGTCTCGCCGGTGCATGTCCAGTACCTGAAGAACATGGGCGTCGCCGCCTCCGCCTCGATCTCGATCGTCAAGGACGGCGTGCTCTGGGGCCTGATCGCCTGCCACAGTGCCGCGCCGCGCCTGGTCGGCGCCGACCTGCGCGCCGCCTGCCGCGCCCTGGCGGGCGGCCTGTCGCGCCAGATCAAGGCGCGGGAGGAGACCGACGCCTATCGCGAGCGGGTGCGGCTGCGCACCCATGAGGATCGCATCGTCGATCTGCTGCTGCGCCAGGGATCGCTGGACGCGGCGATCTCCCATCATCTCGGCGACATCATGGCGATGCTCGACGGCGACGGCGTCGCGGTGCTGCGTGGCCGGGAGGTGGTGACGGGCGGACGCTGTCCCGCCGAGGACTCGGTGCGCAGGCTGGCGGCCTGGGTGATCGCCAAGCCGGGCCAGCCGGTCTTCGCCAGCAGCACGCTCGTCGGTCACTATGCCCTGCCGGACGCGGAGCAGGGTCTGGCGGGCGGCGTGCTGGCCGTCGTCCTCTCGGCGAGCGAGCCCTGGGTGGTGCTCTGGTTCCGGGCGGAGGAGGTCGAGGTGGTCAACTGGGCCGGCAATCCGCACAAGGCGGCGATGACCGCCGCGGGCGGCACGCTCAATCCGCGCGCCAGCTTCGAGGCCTGGACGGAGATGGTCAGGGGGCGGGCGCGTCGCTGGACCATCCCCGAGGTCGAGGCCGCCGGCCGCCTCTGCGTCGCCGTGATGAACGTCTGGCAGACCCGGCGCATCCAGGATCTCAACCGCCAGCTGCTGACGACGGTCGAGCAGAAGGAGGCGCTGCTCCAGCAGAAGGAATTCCTGATCGGCGAGATCAACCACCGCGTCCAGAACAGCCTGCAGCTCGTCTCCAGCTTCCTGTCGATGCAGGCGCGCGAGAGCGCGGATGCGGCGCTGCAGGCGGCGGTCGGGGAAGCGCGCCGGCGCATCGCCGCGGTGTCGCTGGTGCACCGGCGCCTCTACCGGTCCGACCAGCTCGAGACCATCGATGCGGCCCGCTACCTCGATGAGCTGCTCGACGACCTCGTCGCCTCGATCGGCGAGGACTGGGGCCGGCATCTCGTCCGCGACCTCCAGCCGATCATGCTGCCGAACGACCGGGCCGTCGGCCTCGGCCTGGTGCTGACCGAGCTCGTCATCAACGCCAACAAGTACGCCTATGGCGGCGCCCCGGGACCCCTGCGCGTCACCCTGGCCGAGGACAGGAACCTGTTCCGCCTGATCGTCACGGACGAGGGCGCGGGACGCGGCACGGCCCGCAGCGGCTTCGGCAGCCGGCTGATCGAGGGGCTGGTCCGCCAGCTCGGCGGCACGCTGGACTATGACGACACCCAGCCGGGCACAAGGGCGACGCTCACCGCGCCGATCGAGGCGGTGCGGACATAG
PROTEIN sequence
Length: 715
VRKPGVSDDLDLAACDREPIHIPGSIQPHGLMLVLDPATTAVRQGAGDIEGRLGRADWIGLPCAELLGAATAAAVAAAERGTLRQVAVPGGAESFDGAFHRAGDAVIVELEPAASAASSAALLPQLEAAAAAFERAADLRQLCAVAAVEFRRLIGYDRVMVYQFLEDDAGVVLAEDAAAGQRSFLNHHFPAADIPRQARALYVRNLVRVIPDVAYRPAPLVPAARPAAEPLDMSDCALRSVSPVHVQYLKNMGVAASASISIVKDGVLWGLIACHSAAPRLVGADLRAACRALAGGLSRQIKAREETDAYRERVRLRTHEDRIVDLLLRQGSLDAAISHHLGDIMAMLDGDGVAVLRGREVVTGGRCPAEDSVRRLAAWVIAKPGQPVFASSTLVGHYALPDAEQGLAGGVLAVVLSASEPWVVLWFRAEEVEVVNWAGNPHKAAMTAAGGTLNPRASFEAWTEMVRGRARRWTIPEVEAAGRLCVAVMNVWQTRRIQDLNRQLLTTVEQKEALLQQKEFLIGEINHRVQNSLQLVSSFLSMQARESADAALQAAVGEARRRIAAVSLVHRRLYRSDQLETIDAARYLDELLDDLVASIGEDWGRHLVRDLQPIMLPNDRAVGLGLVLTELVINANKYAYGGAPGPLRVTLAEDRNLFRLIVTDEGAGRGTARSGFGSRLIEGLVRQLGGTLDYDDTQPGTRATLTAPIEAVRT*