ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_41009_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 17143..18210

Top 3 Functional Annotations

Value Algorithm Source
Putative malate dehydrogenase n=1 Tax=Rhizobium sp. RepID=L0NLM1_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 360.0
  • Bit_score: 368
  • Evalue 6.30e-99
Putative malate dehydrogenase {ECO:0000313|EMBL:CCF21671.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 360.0
  • Bit_score: 368
  • Evalue 8.80e-99
oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 354.0
  • Bit_score: 357
  • Evalue 4.10e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCCGAACCGATCCGCTTCACCGCAGGAAGCCTCGCTCCTTTCGTGGAGCAAGCTCTCATCGCCGGCGGCGCCGACGCCGCCTCCGCCGACGCGGCGACGCGGGCGATGATGCACGCTTCGCGCCTGGGCGTGGACAGCCATGGCGTGCGCCTCCTGCCCTATTACCTGTCGGTGATCGCCACCGGCGAGGTCAACGGCGCGCCGGAGCTCCGGCTGGAGCGGGCCGCCGGATCCGCGGCGATCCTCGACGCCGACGGGGCCATCGGCCACCTCGCCTGCTACCGCGCCATGGCGGAGGCGGTCGCCATCGCCAGGGAGCAGGGGGTGGGCGCCGTCACCATCAAGCGCATGTCGCACATGGGCGCAGCCGGCGCCTATGCGCTGTGGGCGGCCGAGCAGGGCTGCATCGGCTTCCTCACCGCCAATTCCGATGCCGCGGTGCGCCTGCATGACGGGCGCGACGCCTTCCACGGCACCAGCCCGATCGCCTGGGGCGCGCCGGTGCCGGGCCAGCGGCCCTGGCTGCTCGACATGGCGACCAGCGCCATCCCGATGAACCGCGTGCTGCTCTACCGCTCGCTCGGCCGCATCCTGCCGGCGGACGTGGCGGTGGACGAGGTCGGGCGCGTCACCACCGACCCGCACGCGGCCCGGGTGCTCTCGCCGGTCGGCGGCGAATATGGCTACAAGGGCGCCGGCCTCGCCGGCCTGGTGGAGATCCTCAGCGCGCCGCTCACCGGCATGGCGCTCTCCACCGAGCTCAAGCCGATGTACGGCGTCTCGACGGGCCGGCCGCGCGACATGGGCGGCTTCGCCCTGGCGATCGACCCTTCGGCCTTCATCCCCGCCCCGATCTACGAGGGCATCATGACCCGCTACCTCGAGAGCATCCGCGCCGCCGCCCCGGCCGAAGGCGCCGCCGGCCAGCCGATGGCTCCGGGCGACCGCGAATGGGCCGTGGAAGCGGAGCGGCTGAAGAACGGCATCCCGGTCGACCCCGACACGGTGGCGGCGATGGAGCAGCTGTCGGCCACGCACGGCCTGACGCCGCCGGTCAGGGCGTAG
PROTEIN sequence
Length: 356
MAEPIRFTAGSLAPFVEQALIAGGADAASADAATRAMMHASRLGVDSHGVRLLPYYLSVIATGEVNGAPELRLERAAGSAAILDADGAIGHLACYRAMAEAVAIAREQGVGAVTIKRMSHMGAAGAYALWAAEQGCIGFLTANSDAAVRLHDGRDAFHGTSPIAWGAPVPGQRPWLLDMATSAIPMNRVLLYRSLGRILPADVAVDEVGRVTTDPHAARVLSPVGGEYGYKGAGLAGLVEILSAPLTGMALSTELKPMYGVSTGRPRDMGGFALAIDPSAFIPAPIYEGIMTRYLESIRAAAPAEGAAGQPMAPGDREWAVEAERLKNGIPVDPDTVAAMEQLSATHGLTPPVRA*