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berkeley_reactor_200306_biofilm_scaffold_41009_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(28215..30092)

Top 3 Functional Annotations

Value Algorithm Source
AsmA n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAT0_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 606.0
  • Bit_score: 368
  • Evalue 1.10e-98
AsmA {ECO:0000313|EMBL:EJW10211.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 606.0
  • Bit_score: 368
  • Evalue 1.60e-98
outer membrane protein assembly protein AsmA similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 604.0
  • Bit_score: 338
  • Evalue 2.70e-90

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1878
ATGAAGCGTATCGGGCTGGCTCTGGCGACCATCGCCGCCGCTCTCGTGGCGTTCGCCGCGGTCATCGCCTGGGCGGTGCCGGAGGATGCGCTGCGCCGCGCCGTCTCGGGACAGATCGAGGCCCTGACCGGTCGCAGCCCGGTGATCGACGGGCCGGTGCGGCTGGTCTTCGTGCCGGTGCCAGGCATCAGCGTCGAGAAGATCGCCATCCCCGGCCTGCCCGGCACGCCGCCGCTGCTCGAGGCGGACGCCGCGGTGGGCACGCTCGATTTCGCCGCCCTGCTCACCGGCCGCGTCCGCGTCGCCGACCTCACCCTGTTCGGGCCGCACATCGCGCTGGTCGCCGACGACAAGGGCAACTCCTCCTGGGGCTTCCACACCGGCGCGCTGGCCGAGATCGCGGCGAAGAACCCGAACGTGCGCCTGCCCCTGTCCTCGATCCGGCTCCTGAACGGGACCATCACCTATATCGATCTCGGCTCCGGGCGCACGGCGCGGATCGACGTGCCCGACGCCACGCTGGACTGGCCGTCCCCGCAGGGGGACATGTCCCTGGTCGGCATGGTCTCCTGGGGCGGCCATTCCCTCGATCTCTTCGCCAAGATCGCCGATGCGGCCGTGCTGGTCGCGGGCGGCCAGTCCGACATCCGCTGCAAGCTGAACGGGGATCTCGTCAACCTTGCCGTGCGCGGCGCCCTTTCGAGCGACGGGCGCCTGGAGGGCAGCCTCAACGCCACCGGCCCTTCGCTGCGCCAGATGGTGCGCTGGCTCGGCCTGCGCCTCGGCGAGGGCAAGTCGATCGGCGAGTTCAAGCTGCAATCGCCGGCGGTGATCGACGCCAAGAGCATCGCCCTGTCCGCGGTGCAGCTCGAGCTCGACGGCAACCAGGCCGACGGCGCCCTCAACGTGCGGTTCGACGGGCCGCGGCCGAAGATCAGCGGCACGCTGGCCGCCGACACGCTCGACATCTCCTCCTATTCCTCCGAATGGGCGCTGGTCGACAGCAGCCCCGGGCGCTGGCGGCGCGAGCCGATCGACCTCGCCAGCCTTGCGCTCGCCGATATCGACCTCAGGCTGTCGGCGGGCGACGCCGTCATGGACAAGGTCCGGCTCGGCCATATCGCGGCGGCGATCGTCGCCAGCAAGGGCCTGATGGAGCTGTCGCTGGGCGAGGTGGCGGCCTATGGCGGCACGCTCAAGGGCCGCCTCACCATGGCGCTCACCGGCGATGTGCCTAGGGTCGGCGCCAATCTCAGCTTCGAGGAGGTCGAGATGGGCCGGGCGCTCGGCGACTTCCTCGCCTTCCACCGGCTCGAGGGCATCGGCAAGGGCAGCATCGAGGTGACTGCCGTCGGCCGCTCCATCGAGGATCTCGCCGCCTCCCTGGTCGGCCAGGCCAGCTTCACCGTGCGCAACGGCGCGCTGATCGGCGTCGATCTCGCCGACGTGATGCGCCGCATCGAGCGTCGCCCGCTCACCGCCACGCTGGAGCCGCGCAGCGGCCGCACCGCCTTCGAGACCGGGGCGGTGTCCTTCGCCATCGACGGCGGTGTCGCCCGCACCACCGACGCCCGGCTCGACGGGGGCGCCCTGACGGTCGCCCTCGGCGGCAGCGCCGGCGTCAAGGCGCGCGACTTCGACTTGGCGGGCGAGGCGAGCTTCTCCTCCAACGAGGCGGGGCCGCCCTTCACCCTGCCGTTCAAGATCACCGGCCAATGGGACGACCCCTCGGTCTCGCCCGATCCCGACGCGCTGATCCGCCGCTCCGGCGCGGCGGCGCCGCTGCTGCAGGGCAATGCCAGCGCCTTCGCCGATACCGGCAACGGCGAGAAGCATATCGAGATGAACCCCCTCAAGGGCCAGGCGATCTCGCCCTGA
PROTEIN sequence
Length: 626
MKRIGLALATIAAALVAFAAVIAWAVPEDALRRAVSGQIEALTGRSPVIDGPVRLVFVPVPGISVEKIAIPGLPGTPPLLEADAAVGTLDFAALLTGRVRVADLTLFGPHIALVADDKGNSSWGFHTGALAEIAAKNPNVRLPLSSIRLLNGTITYIDLGSGRTARIDVPDATLDWPSPQGDMSLVGMVSWGGHSLDLFAKIADAAVLVAGGQSDIRCKLNGDLVNLAVRGALSSDGRLEGSLNATGPSLRQMVRWLGLRLGEGKSIGEFKLQSPAVIDAKSIALSAVQLELDGNQADGALNVRFDGPRPKISGTLAADTLDISSYSSEWALVDSSPGRWRREPIDLASLALADIDLRLSAGDAVMDKVRLGHIAAAIVASKGLMELSLGEVAAYGGTLKGRLTMALTGDVPRVGANLSFEEVEMGRALGDFLAFHRLEGIGKGSIEVTAVGRSIEDLAASLVGQASFTVRNGALIGVDLADVMRRIERRPLTATLEPRSGRTAFETGAVSFAIDGGVARTTDARLDGGALTVALGGSAGVKARDFDLAGEASFSSNEAGPPFTLPFKITGQWDDPSVSPDPDALIRRSGAAAPLLQGNASAFADTGNGEKHIEMNPLKGQAISP*